RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 BBS9Q3SYG4 887 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 ANKRD45Q5TZF3 282 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 ANGEL2Q5VTE6 544 aaKnown RBP9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 HOMER1Q86YM7 354 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 GCC1Q96CN9 775 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 DHRS1Q96LJ7 313 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 ZDHHC15Q96MV8 337 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 FOXQ1Q9C009 403 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 EPN3Q9H201 632 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 RWDD1Q9H446 243 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 ACSS3Q9H6R3 686 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 HDAC9Q9UKV0 1011 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 MYH13Q9UKX3 1938 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 DAGLAQ9Y4D2 1042 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 PTCH2Q9Y6C5 1203 aa9.69□□□□□ -0.86
ECHDC1-212ENST00000461239 POLR2AP24928 1970 aaKnown RBP9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 GAKO14976 1311 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 C9IYK1 514 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 LRIG2O94898 1065 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 ATP5JP18859 108 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 HTRA3P83110 453 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 MECOMQ03112 1051 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 DLGAP5Q15398 846 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 TDRD10Q5VZ19 366 aaKnown RBP9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 CST9Q5W186 159 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 HHIPL2Q6UWX4 724 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 ARMCX6Q7L4S7 300 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 KIAA0907Q7Z7F0 614 aaPredicted RBP9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 PPP1R13LQ8WUF5 828 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 NSUN4Q96CB9 384 aaKnown RBP9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 BOLA2Q9H3K6 86 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 TDRD3Q9H7E2 651 aaKnown RBP9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 AKTIPQ9H8T0 292 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 ZNF70Q9UC06 446 aaPredicted RBP9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 ABCF2Q9UG63 623 aa9.68□□□□□ -0.86
ECHDC1-212ENST00000461239 PITPNM2Q9BZ72 1349 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 CLRN2A0PK11 232 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 ADCY3O60266 1144 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 CHGBP05060 677 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 GBP1P32455 592 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 NUCB1Q02818 461 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 PRAMEF18Q5VWM3 479 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 ADGRA1Q86SQ6 560 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 PI4K2BQ8TCG2 481 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 TEKT1Q969V4 418 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 LENG1Q96BZ8 264 aaPredicted RBP9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 HAUS7Q99871 368 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 SUSD2Q9UGT4 822 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 PCOLCE2Q9UKZ9 415 aa9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 MYO5AQ9Y4I1 1855 aaKnown RBP9.67□□□□□ -0.86
ECHDC1-212ENST00000461239 SPATA31C1P0DKV0 1188 aa9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 HSPA6P17066 643 aa9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 RBM5P52756 815 aaKnown RBP eCLIP9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 CACNB3P54284 484 aa9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 CDC42EP5Q6NZY7 148 aa9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 KRT26Q7Z3Y9 468 aa9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 ZGPATQ8N5A5 531 aaKnown RBP9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 DCPSQ96C86 337 aaKnown RBP9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 GPATCH3Q96I76 525 aa9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 SPATA9Q9BWV2 254 aa9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 SSU72Q9NP77 194 aaKnown RBP9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 ECHDC1Q9NTX5 307 aa9.66□□□□□ -0.86
ECHDC1-212ENST00000461239 CNTNAP1P78357 1384 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 MAST3O60307 1309 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 CNTNAP5Q8WYK1 1306 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 GPR75-ASB3A0A0A6YYF3 556 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 KRBA1A5PL33 1030 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 GOLIM4O00461 696 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 CLEC3AO75596 197 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 ZNF143P52747 638 aaPredicted RBP9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 RHBDL3P58872 404 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 NFIAQ12857 509 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 SPTY2D1Q68D10 685 aaPredicted RBP9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 CDPF1Q6NVV7 123 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 C16orf86Q6ZW13 317 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 CHD1LQ86WJ1 897 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 MFSD2AQ8NA29 543 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 DNAJB8Q8NHS0 232 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 CDCA5Q96FF9 252 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 TEPSINQ96N21 525 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 FAM86C1Q9NVL1 165 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 RAI14Q9P0K7 980 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 LRP2BPQ9P2M1 347 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 STAP2Q9UGK3 403 aa9.65□□□□□ -0.86
ECHDC1-212ENST00000461239 RFX7Q2KHR2 1363 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 MROH7-TTC4A0A0A0MT08 1334 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 SSC5DA1L4H1 1573 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 DOCK2Q92608 1830 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 TCRBV5S4A2TA0A5A2 114 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 CBFA2T2O43439 604 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 TP53P04637 393 aaPredicted RBP9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 CENPBP07199 599 aaPredicted RBP9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 FAM153BP0C7A2 387 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 RAB6AP20340 208 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 MX1P20591 662 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 BTDP43251 543 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms