RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 RASSF10A6NK89 507 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 PDXKO00764 312 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 EIF3DO15371 548 aaKnown RBP eCLIP12.03□□□□□ -0.48
IFT88-204ENST00000461115 ZSCAN12O43309 604 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 PPP1R12BO60237 982 aaPredicted RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 P4HBP07237 508 aaKnown RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 MAPTP10636 758 aaKnown RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 CASP14P31944 242 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 UBXN2AP68543 259 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 UBXN1Q04323 297 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 MAN2A1Q16706 1144 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 ARSIQ5FYB1 569 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 HERC4Q5GLZ8 1057 aaPredicted RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 C9orf131Q5VYM1 1079 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 TMTC1Q8IUR5 882 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 SULF1Q8IWU6 871 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 CHST13Q8NET6 341 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 RMDN3Q96TC7 470 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 RUSC1Q9BVN2 902 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 STRA6Q9BX79 667 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 FGFBP2Q9BYJ0 223 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 EDEM3Q9BZQ6 932 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 WRAP73Q9P2S5 460 aaPredicted RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 R3HCC1Q9Y3T6 440 aaKnown RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 COL4A3BPQ9Y5P4 624 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 NFASCO94856 1347 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 ARID2Q68CP9 1835 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 A0A0G2JLL6 359 aaPredicted RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 NPHP3-ACAD11A0A0J9YXS1 232 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 RNF225M0QZC1 329 aaPredicted RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 KIF3CO14782 793 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 SSBP05455 408 aaKnown RBP eCLIP12.03□□□□□ -0.48
IFT88-204ENST00000461115 TPM1P09493 284 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 TNNT1P13805 278 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 HNRNPH3P31942 346 aaKnown RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 SFNP31947 248 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 HOXD13P35453 343 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 IREB2P48200 963 aaKnown RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 JAK3P52333 1124 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 MCCD1P59942 119 aaPredicted RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 CDK17Q00537 523 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 KRT76Q01546 638 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 CYP4A11Q02928 519 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 MTMR1Q13613 665 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 BAATQ14032 418 aaPredicted RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 CTTNQ14247 550 aaKnown RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 LRRC41Q15345 812 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 MEA1Q16626 185 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 PTPN21Q16825 1174 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 SNRNP48Q6IEG0 339 aaKnown RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 GPR153Q6NV75 609 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 PRRT2Q7Z6L0 340 aaPredicted RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 C4orf19Q8IY42 314 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 UIMC1Q96RL1 719 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 LXNQ9BS40 222 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 ZSWIM4Q9H7M6 989 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 ACAD9Q9H845 621 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 ABHD10Q9NUJ1 306 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 CYP39A1Q9NYL5 469 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 FZD1Q9UP38 647 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 SIK3Q9Y2K2 1263 aa12.03□□□□□ -0.48
IFT88-204ENST00000461115 CTDP1Q9Y5B0 961 aaPredicted RBP12.03□□□□□ -0.48
IFT88-204ENST00000461115 LRRC37A2A6NM11 1700 aa12.02□□□□□ -0.48
IFT88-204ENST00000461115 SPDYE5A6NIY4 337 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 NR3C2P08235 984 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 CCND2P30279 289 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 ICAM3P32942 547 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 GOLGA8FQ08AF8 430 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 GOLGA8DPQ0D2H9 430 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 TBC1D8BQ0IIM8 1120 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 KNOP1Q1ED39 458 aaKnown RBP12.02□□□□□ -0.49
IFT88-204ENST00000461115 VWA3BQ502W6 1294 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 DNTTIP2Q5QJE6 756 aaKnown RBP12.02□□□□□ -0.49
IFT88-204ENST00000461115 ZNF746Q6NUN9 644 aaPredicted RBP12.02□□□□□ -0.49
IFT88-204ENST00000461115 TRIM65Q6PJ69 517 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 MIER3Q7Z3K6 550 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 SFR1Q86XK3 245 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 ERO1BQ86YB8 467 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 RIOX2Q8IUF8 465 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 TRIM59Q8IWR1 403 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 TPH2Q8IWU9 490 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 ANKRD13AQ8IZ07 590 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 DNERQ8NFT8 737 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 NSUN6Q8TEA1 469 aaKnown RBP12.02□□□□□ -0.49
IFT88-204ENST00000461115 C16orf45Q96MC5 204 aaPredicted RBP12.02□□□□□ -0.49
IFT88-204ENST00000461115 IWS1Q96ST2 819 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 NOC4LQ9BVI4 516 aaKnown RBP12.02□□□□□ -0.49
IFT88-204ENST00000461115 TIPINQ9BVW5 301 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 NDST4Q9H3R1 872 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 A1CFQ9NQ94 594 aaKnown RBP12.02□□□□□ -0.49
IFT88-204ENST00000461115 FAM184BQ9ULE4 1060 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 PPP2R2CQ9Y2T4 447 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 CSADQ9Y600 493 aa12.02□□□□□ -0.49
IFT88-204ENST00000461115 ZNFX1Q9P2E3 1918 aaKnown RBP12.01□□□□□ -0.49
IFT88-204ENST00000461115 TTC26A0AVF1 554 aa12.01□□□□□ -0.49
IFT88-204ENST00000461115 GLTPD2A6NH11 291 aa12.01□□□□□ -0.49
IFT88-204ENST00000461115 B4DLN1 442 aa12.01□□□□□ -0.49
IFT88-204ENST00000461115 ADM5C9JUS6 153 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms