RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 WDR81Q562E7 1941 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 ZNF862O60290 1169 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 SPIRE1Q08AE8 756 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 ORC2Q13416 577 aaPredicted RBP22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 ZNF174Q15697 407 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 PSRC1Q6PGN9 363 aaPredicted RBP22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 TRAF7Q6Q0C0 670 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 RUFY4Q6ZNE9 571 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 TRMT1LQ7Z2T5 733 aaKnown RBP22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 DEFB128Q7Z7B8 93 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 HSCBQ8IWL3 235 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 RPUSD2Q8IZ73 545 aaKnown RBP22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 ZBTB10Q96DT7 871 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 MTMR9Q96QG7 549 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 TMEM60Q9H2L4 133 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 PCDHA12Q9UN75 941 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 MYH9P35579 1960 aaKnown RBP22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 SCN5AQ14524 2016 aa22.57■■□□□ 1.2
SNAPC3-204ENST00000461041 COL1A2P08123 1366 aa22.56■■□□□ 1.2
SNAPC3-204ENST00000461041 TOB1P50616 345 aaPredicted RBP22.56■■□□□ 1.2
SNAPC3-204ENST00000461041 PRKCEQ02156 737 aa22.56■■□□□ 1.2
SNAPC3-204ENST00000461041 ZNF484Q5JVG2 852 aa22.56■■□□□ 1.2
SNAPC3-204ENST00000461041 TAF2Q6P1X5 1199 aa22.56■■□□□ 1.2
SNAPC3-204ENST00000461041 ZNF365Q70YC5 407 aa22.56■■□□□ 1.2
SNAPC3-204ENST00000461041 FAM167AQ96KS9 214 aa22.56■■□□□ 1.2
SNAPC3-204ENST00000461041 FOXD4L1Q9NU39 408 aa22.56■■□□□ 1.2
SNAPC3-204ENST00000461041 ZBTB42B2RXF5 422 aa22.55■■□□□ 1.2
SNAPC3-204ENST00000461041 CAND2O75155 1236 aa22.55■■□□□ 1.2
SNAPC3-204ENST00000461041 PARNO95453 639 aaKnown RBP22.55■■□□□ 1.2
SNAPC3-204ENST00000461041 OATP04181 439 aa22.55■■□□□ 1.2
SNAPC3-204ENST00000461041 TXKP42681 527 aa22.55■■□□□ 1.2
SNAPC3-204ENST00000461041 NBR1Q14596 966 aa22.55■■□□□ 1.2
SNAPC3-204ENST00000461041 GPNMBQ14956 572 aa22.55■■□□□ 1.2
SNAPC3-204ENST00000461041 NCAPH2Q6IBW4 605 aa22.55■■□□□ 1.2
SNAPC3-204ENST00000461041 BANK1Q8NDB2 785 aa22.55■■□□□ 1.2
SNAPC3-204ENST00000461041 RNPC3Q96LT9 517 aaKnown RBP22.55■■□□□ 1.2
SNAPC3-204ENST00000461041 TTC12Q9H892 705 aaPredicted RBP22.55■■□□□ 1.2
SNAPC3-204ENST00000461041 RSPH10B2B2RC85 870 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 FGBP02675 491 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 PFKMP08237 780 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 RSPH10BP0C881 870 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 PDCP20941 246 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 EPHA7Q15375 998 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 LRIT3Q3SXY7 679 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 MTHFD1LQ6UB35 978 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 RPAINQ86UA6 219 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 DNAJB3Q8WWF6 145 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 NRBP2Q9NSY0 501 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 PCDHA2Q9Y5H9 948 aa22.54■■□□□ 1.2
SNAPC3-204ENST00000461041 NBNO60934 754 aa22.53■■□□□ 1.2
SNAPC3-204ENST00000461041 CTSHP09668 335 aa22.53■■□□□ 1.2
SNAPC3-204ENST00000461041 KLRC1P26715 233 aa22.53■■□□□ 1.2
SNAPC3-204ENST00000461041 PSMC5P62195 406 aa22.53■■□□□ 1.2
SNAPC3-204ENST00000461041 MBTPS1Q14703 1052 aa22.53■■□□□ 1.2
SNAPC3-204ENST00000461041 CEP131Q9UPN4 1083 aa22.53■■□□□ 1.2
SNAPC3-204ENST00000461041 PCDHB6Q9Y5E3 794 aa22.53■■□□□ 1.2
SNAPC3-204ENST00000461041 TRIOBPQ9H2D6 2365 aa22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 SMIM35A0A1B0GVV1 85 aa22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 VPS37CA5D8V6 355 aaPredicted RBP22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 STBD1O95210 358 aa22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 P4HBP07237 508 aaKnown RBP22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 OR52Z1P0C646 297 aa22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 QARSP47897 775 aaKnown RBP22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 XKR3Q5GH77 459 aa22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 OTOP2Q7RTS6 562 aa22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 RSPH3Q86UC2 560 aa22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 C4orf32Q8N8J7 132 aa22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 HERVK_113Q902F9 699 aa22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 FTOQ9C0B1 505 aaKnown RBP eCLIP22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 FAM49AQ9H0Q0 323 aaPredicted RBP22.52■■□□□ 1.2
SNAPC3-204ENST00000461041 RANBP2P49792 3224 aaKnown RBP22.52■■□□□ 1.19
SNAPC3-204ENST00000461041 C22orf31O95567 290 aa22.51■■□□□ 1.19
SNAPC3-204ENST00000461041 CXCL10P02778 98 aa22.51■■□□□ 1.19
SNAPC3-204ENST00000461041 RPLP2P05387 115 aaKnown RBP22.51■■□□□ 1.19
SNAPC3-204ENST00000461041 RILPL1Q5EBL4 403 aa22.51■■□□□ 1.19
SNAPC3-204ENST00000461041 FAM26DQ5JW98 314 aa22.51■■□□□ 1.19
SNAPC3-204ENST00000461041 RASIP1Q5U651 963 aa22.51■■□□□ 1.19
SNAPC3-204ENST00000461041 DYDC2Q96IM9 177 aa22.51■■□□□ 1.19
SNAPC3-204ENST00000461041 RGL1Q9NZL6 768 aa22.51■■□□□ 1.19
SNAPC3-204ENST00000461041 SEPT9Q9UHD8 586 aaPredicted RBP22.51■■□□□ 1.19
SNAPC3-204ENST00000461041 SOX1O00570 391 aaPredicted RBP22.5■■□□□ 1.19
SNAPC3-204ENST00000461041 DKC1O60832 514 aaKnown RBP eCLIP22.5■■□□□ 1.19
SNAPC3-204ENST00000461041 SYT1P21579 422 aa22.5■■□□□ 1.19
SNAPC3-204ENST00000461041 FXR1P51114 621 aaKnown RBP eCLIP22.5■■□□□ 1.19
SNAPC3-204ENST00000461041 EIF2AK1Q9BQI3 630 aaKnown RBP22.5■■□□□ 1.19
SNAPC3-204ENST00000461041 LXNQ9BS40 222 aa22.5■■□□□ 1.19
SNAPC3-204ENST00000461041 NIFKQ9BYG3 293 aaKnown RBP22.5■■□□□ 1.19
SNAPC3-204ENST00000461041 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.5■■□□□ 1.19
SNAPC3-204ENST00000461041 WRAP73Q9P2S5 460 aaPredicted RBP22.5■■□□□ 1.19
SNAPC3-204ENST00000461041 TMEM150BA6NC51 233 aa22.49■■□□□ 1.19
SNAPC3-204ENST00000461041 POTEMA6NI47 508 aa22.49■■□□□ 1.19
SNAPC3-204ENST00000461041 DDX11L8A8MPP1 907 aa22.49■■□□□ 1.19
SNAPC3-204ENST00000461041 RBAK-RBAKDNI3L0D1 243 aa22.49■■□□□ 1.19
SNAPC3-204ENST00000461041 CHRNA1P02708 482 aa22.49■■□□□ 1.19
SNAPC3-204ENST00000461041 ACTN1P12814 892 aa22.49■■□□□ 1.19
SNAPC3-204ENST00000461041 MRPS6P82932 125 aaKnown RBP22.49■■□□□ 1.19
SNAPC3-204ENST00000461041 CYP4A11Q02928 519 aa22.49■■□□□ 1.19
SNAPC3-204ENST00000461041 MGAT3Q09327 533 aa22.49■■□□□ 1.19
SNAPC3-204ENST00000461041 PTGDRQ13258 359 aa22.49■■□□□ 1.19
SNAPC3-204ENST00000461041 TARBP2Q15633 366 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms