RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 RRN3P2A6NIE6 340 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 DKC1O60832 514 aaKnown RBP eCLIP12.44□□□□□ -0.42
APTX-209ENST00000460940 KIF20AO95235 890 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 BMP15O95972 392 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 UQCRHP07919 91 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 MARK3P27448 753 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 NASPP49321 788 aaPredicted RBP12.44□□□□□ -0.42
APTX-209ENST00000460940 SPIRE1Q08AE8 756 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 PLCB4Q15147 1175 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 LMBR1Q8WVP7 490 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 GTPBP4Q9BZE4 634 aaKnown RBP12.44□□□□□ -0.42
APTX-209ENST00000460940 TMEM60Q9H2L4 133 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 RNPEPQ9H4A4 650 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 ZSCAN16Q9H4T2 348 aaPredicted RBP12.44□□□□□ -0.42
APTX-209ENST00000460940 TTC12Q9H892 705 aaPredicted RBP12.44□□□□□ -0.42
APTX-209ENST00000460940 PCDHB6Q9Y5E3 794 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 POTEB3A0JP26 581 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 TRIM43BA6NCK2 446 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 PITPNM1O00562 1244 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 HBP1O60381 514 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 RAG1P15918 1043 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 PRPHP41219 470 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 RBL2Q08999 1139 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 RESTQ13127 1097 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 PTK7Q13308 1070 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 EPHA7Q15375 998 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 GRIK4Q16099 956 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 TMEM266Q2M3C6 531 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 POTEBQ6S5H4 581 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 FERMT3Q86UX7 667 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 CAGE1Q8TC20 777 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 NEK9Q8TD19 979 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 BBXQ8WY36 941 aaPredicted RBP12.44□□□□□ -0.42
APTX-209ENST00000460940 TRIM43Q96BQ3 446 aaPredicted RBP12.44□□□□□ -0.42
APTX-209ENST00000460940 LBHD1Q9BQE6 289 aaPredicted RBP12.44□□□□□ -0.42
APTX-209ENST00000460940 NOC4LQ9BVI4 516 aaKnown RBP12.44□□□□□ -0.42
APTX-209ENST00000460940 HIPK3Q9H422 1215 aa12.44□□□□□ -0.42
APTX-209ENST00000460940 TIMP1P01033 207 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 RPLP2P05387 115 aaKnown RBP12.43□□□□□ -0.42
APTX-209ENST00000460940 SYN1P17600 705 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 TXKP42681 527 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 PSMC5P62195 406 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 PRKCEQ02156 737 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 BFSP2Q13515 415 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 NCAPH2Q6IBW4 605 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 SH3RF1Q7Z6J0 888 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 SERINC5Q86VE9 423 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 CKAP2LQ8IYA6 745 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 C4orf32Q8N8J7 132 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 PPP1R13LQ8WUF5 828 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 CTAGE1Q96RT6 745 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 RAB34Q9BZG1 259 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 SETD4Q9NVD3 440 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 CEP131Q9UPN4 1083 aa12.43□□□□□ -0.42
APTX-209ENST00000460940 R3HCC1Q9Y3T6 440 aaKnown RBP12.43□□□□□ -0.42
APTX-209ENST00000460940 MBLAC1A4D2B0 266 aaPredicted RBP12.42□□□□□ -0.42
APTX-209ENST00000460940 EML1O00423 815 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 CAND2O75155 1236 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 OATP04181 439 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 P4HBP07237 508 aaKnown RBP12.42□□□□□ -0.42
APTX-209ENST00000460940 INSRRP14616 1297 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 QARSP47897 775 aaKnown RBP12.42□□□□□ -0.42
APTX-209ENST00000460940 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
APTX-209ENST00000460940 ADAM17P78536 824 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 ATP2C1P98194 919 aaPredicted RBP12.42□□□□□ -0.42
APTX-209ENST00000460940 PTGDRQ13258 359 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 ZNF484Q5JVG2 852 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 TAF2Q6P1X5 1199 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 SASS6Q6UVJ0 657 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 TUBE1Q9UJT0 475 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 STK24Q9Y6E0 443 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 LTBP2Q14767 1821 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 ZNF862O60290 1169 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 CYP2C9P11712 490 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 ATP4AP20648 1035 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 HIC1Q14526 733 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 UGCGQ16739 394 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 XKR3Q5GH77 459 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 ARL6IP4Q66PJ3 421 aaKnown RBP12.42□□□□□ -0.42
APTX-209ENST00000460940 MFSD5Q6N075 450 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 ERMNQ8TAM6 284 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 NRBP2Q9NSY0 501 aa12.42□□□□□ -0.42
APTX-209ENST00000460940 TREHO43280 583 aa12.41□□□□□ -0.42
APTX-209ENST00000460940 ZSCAN22P10073 491 aaPredicted RBP12.41□□□□□ -0.42
APTX-209ENST00000460940 CLEC17AQ6ZS10 378 aa12.41□□□□□ -0.42
APTX-209ENST00000460940 RPAINQ86UA6 219 aa12.41□□□□□ -0.42
APTX-209ENST00000460940 TMEM199Q8N511 208 aa12.41□□□□□ -0.42
APTX-209ENST00000460940 RETREG2Q8NC44 543 aa12.41□□□□□ -0.42
APTX-209ENST00000460940 SPRYD3Q8NCJ5 442 aa12.41□□□□□ -0.42
APTX-209ENST00000460940 DHX38Q92620 1227 aaKnown RBP12.41□□□□□ -0.42
APTX-209ENST00000460940 LXNQ9BS40 222 aa12.41□□□□□ -0.42
APTX-209ENST00000460940 PPP1R12CQ9BZL4 782 aa12.41□□□□□ -0.42
APTX-209ENST00000460940 ZSWIM4Q9H7M6 989 aa12.41□□□□□ -0.42
APTX-209ENST00000460940 PPME1Q9Y570 386 aa12.41□□□□□ -0.42
APTX-209ENST00000460940 POTEMA6NI47 508 aa12.4□□□□□ -0.42
APTX-209ENST00000460940 LETM1O95202 739 aaPredicted RBP12.4□□□□□ -0.42
APTX-209ENST00000460940 PARNO95453 639 aaKnown RBP12.4□□□□□ -0.42
APTX-209ENST00000460940 ZSCAN20P17040 1043 aaPredicted RBP12.4□□□□□ -0.42
APTX-209ENST00000460940 RFC2P35250 354 aa12.4□□□□□ -0.42
APTX-209ENST00000460940 MAGEA10P43363 369 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms