RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 PKN1Q16512 942 aa6.59□□□□□ -1.35
VPS8-214ENST00000458721 CDC37Q16543 378 aaPredicted RBP6.59□□□□□ -1.35
VPS8-214ENST00000458721 KIAA0753Q2KHM9 967 aa6.59□□□□□ -1.35
VPS8-214ENST00000458721 TRIM71Q2Q1W2 868 aaKnown RBP6.59□□□□□ -1.35
VPS8-214ENST00000458721 MCMDC2Q4G0Z9 681 aa6.59□□□□□ -1.35
VPS8-214ENST00000458721 PLEKHG4Q58EX7 1191 aa6.59□□□□□ -1.35
VPS8-214ENST00000458721 SYTL5Q8TDW5 730 aaPredicted RBP6.59□□□□□ -1.35
VPS8-214ENST00000458721 COPS5Q92905 334 aa6.59□□□□□ -1.35
VPS8-214ENST00000458721 HDAC6Q9UBN7 1215 aa6.59□□□□□ -1.35
VPS8-214ENST00000458721 DDX41Q9UJV9 622 aaKnown RBP6.59□□□□□ -1.35
VPS8-214ENST00000458721 DNMT3LQ9UJW3 386 aa6.59□□□□□ -1.35
VPS8-214ENST00000458721 FSD2A1L4K1 749 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 RSPH10B2B2RC85 870 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 C5orf67F2Z3F1 127 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 SPINT1O43278 529 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 RB1P06400 928 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 RSPH10BP0C881 870 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 GNAT1P11488 350 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 ZP2Q05996 745 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 MBTPS1Q14703 1052 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 LY6KQ17RY6 165 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.58□□□□□ -1.36
VPS8-214ENST00000458721 USH1GQ495M9 461 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 EPC2Q52LR7 807 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 RRP12Q5JTH9 1297 aaKnown RBP6.58□□□□□ -1.36
VPS8-214ENST00000458721 ZNF618Q5T7W0 954 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 VPS53Q5VIR6 699 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 ARHGEF16Q5VV41 709 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 SEPT14Q6ZU15 432 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 STOX1Q6ZVD7 989 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 FBXO11Q86XK2 927 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 ADHFE1Q8IWW8 467 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 DHX37Q8IY37 1157 aaKnown RBP6.58□□□□□ -1.36
VPS8-214ENST00000458721 BANK1Q8NDB2 785 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.58□□□□□ -1.36
VPS8-214ENST00000458721 SEPT8Q92599 483 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 ANKS1AQ92625 1134 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 TOP1MTQ969P6 601 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 PPP2R3CQ969Q6 453 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 YME1L1Q96TA2 773 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 PRRX2Q99811 253 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 C11orf84Q9BUA3 381 aaPredicted RBP6.58□□□□□ -1.36
VPS8-214ENST00000458721 AMNQ9BXJ7 453 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 NSUN3Q9H649 340 aaKnown RBP6.58□□□□□ -1.36
VPS8-214ENST00000458721 KAT14Q9H8E8 782 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 PXMP2Q9NR77 195 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 MTUS1Q9ULD2 1270 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 MTMR7Q9Y216 660 aa6.58□□□□□ -1.36
VPS8-214ENST00000458721 KIAA1671Q9BY89 1806 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 KAT6AQ92794 2004 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 FRMPD4Q14CM0 1322 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 A0A0D9SFI3 127 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 C17orf102A2RUQ5 167 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 PARP1P09874 1014 aaKnown RBP6.57□□□□□ -1.36
VPS8-214ENST00000458721 ZNF286BP0CG31 522 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 VSIG8P0DPA2 414 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 IL9P15248 144 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 PDE1AP54750 535 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 AAMPQ13685 434 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 SMAD2Q15796 467 aaKnown RBP6.57□□□□□ -1.36
VPS8-214ENST00000458721 QRICH1Q2TAL8 776 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 GNPTABQ3T906 1256 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 TPRNQ4KMQ1 711 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 CELF3Q5SZQ8 465 aaKnown RBP6.57□□□□□ -1.36
VPS8-214ENST00000458721 C20orf194Q5TEA3 1177 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 SPRED2Q7Z698 418 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 RPAINQ86UA6 219 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 ADGRF4Q8IZF3 695 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 MYOCDQ8IZQ8 938 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 DBF4BQ8NFT6 615 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 MFSD14AQ96MC6 490 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 PDCD2LQ9BRP1 358 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 PLVAPQ9BX97 442 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 USP26Q9BXU7 913 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 CNNM2Q9H8M5 875 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 CD320Q9NPF0 282 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 COL20A1Q9P218 1284 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 ZNF215Q9UL58 517 aaPredicted RBP6.57□□□□□ -1.36
VPS8-214ENST00000458721 KMT2EQ8IZD2 1858 aa6.57□□□□□ -1.36
VPS8-214ENST00000458721 NEDD4P46934 1319 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 ADGRA3Q8IWK6 1321 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 TTC3P53804 2025 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 FAM86C2PA6NEL3 165 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 ESPNB1AK53 854 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 H3BRB1 525 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 HIP1O00291 1037 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 NOP56O00567 594 aaKnown RBP6.56□□□□□ -1.36
VPS8-214ENST00000458721 ZNF213O14771 459 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 ZBTB5O15062 677 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 PPFIA3O75145 1194 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 GGPS1O95749 300 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 EIF2AK2P19525 551 aaKnown RBP6.56□□□□□ -1.36
VPS8-214ENST00000458721 UBA1P22314 1058 aaKnown RBP6.56□□□□□ -1.36
VPS8-214ENST00000458721 CCND2P30279 289 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 THPOP40225 353 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 MRE11P49959 708 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 CHMP4BP1P59074 171 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 RAB15P59190 212 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 NHLH1Q02575 133 aa6.56□□□□□ -1.36
VPS8-214ENST00000458721 SMAD4Q13485 552 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms