RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 PLEKP08567 350 aaPredicted RBP17.78■□□□□ 0.44
LSS-205ENST00000457828 FKBP3Q00688 224 aaKnown RBP17.78■□□□□ 0.44
LSS-205ENST00000457828 DACT2Q5SW24 774 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 ANO3Q9BYT9 981 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 AP5M1Q9H0R1 490 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 VIPAS39Q9H9C1 493 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.78■□□□□ 0.449e-7■■■■■ 126.4
LSS-205ENST00000457828 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.78■□□□□ 0.44
LSS-205ENST00000457828 TAF1CQ15572 869 aaPredicted RBP17.78■□□□□ 0.44
LSS-205ENST00000457828 ANKRD13AQ8IZ07 590 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 CACNA2D3Q8IZS8 1091 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 RBM46Q8TBY0 533 aaKnown RBP17.78■□□□□ 0.44
LSS-205ENST00000457828 MAGEF1Q9HAY2 307 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 M0QZ92 97 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 CCDC172P0C7W6 258 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 NBPF12Q5TAG4 269 aaPredicted RBP17.78■□□□□ 0.44
LSS-205ENST00000457828 FBXW10Q5XX13 1052 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 ADGRF4Q8IZF3 695 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 RTFDC1Q9BY42 306 aaPredicted RBP17.78■□□□□ 0.44
LSS-205ENST00000457828 NSRP1Q9H0G5 558 aaKnown RBP17.78■□□□□ 0.44
LSS-205ENST00000457828 RRAGCQ9HB90 399 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 ARMCX3Q9UH62 379 aaPredicted RBP17.78■□□□□ 0.44
LSS-205ENST00000457828 FBXO40Q9UH90 709 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 RAB21Q9UL25 225 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 TARSL2A2RTX5 802 aaKnown RBP17.77■□□□□ 0.44
LSS-205ENST00000457828 MAP2K7O14733 419 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 KRT14P02533 472 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 IRAK1P51617 712 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 GRM4Q14833 912 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 NT5DC1Q5TFE4 455 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 TRAPPC11Q7Z392 1133 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 ADGRA1Q86SQ6 560 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 RIOK1Q9BRS2 568 aaKnown RBP17.77■□□□□ 0.44
LSS-205ENST00000457828 TMEM60Q9H2L4 133 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 POTEMA6NI47 508 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 GCNT3O95395 438 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 BIRC3Q13489 604 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 FAM205AQ6ZU69 1335 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 MRC1P22897 1456 aa17.77■□□□□ 0.44
LSS-205ENST00000457828 GUCY1A3Q02108 690 aa17.77■□□□□ 0.43
LSS-205ENST00000457828 FNBP1Q96RU3 617 aa17.77■□□□□ 0.43
LSS-205ENST00000457828 MTRF1LQ9UGC7 380 aaKnown RBP17.77■□□□□ 0.43
LSS-205ENST00000457828 KIAA1024Q9UPX6 916 aa17.77■□□□□ 0.43
LSS-205ENST00000457828 XRCC5P13010 732 aaKnown RBP17.77■□□□□ 0.43
LSS-205ENST00000457828 COG2Q14746 738 aa17.77■□□□□ 0.43
LSS-205ENST00000457828 CRY2Q49AN0 593 aa17.77■□□□□ 0.43
LSS-205ENST00000457828 FAM102BQ5T8I3 360 aa17.77■□□□□ 0.43
LSS-205ENST00000457828 NLGN2Q8NFZ4 835 aa17.77■□□□□ 0.43
LSS-205ENST00000457828 SMIM22K7EJ46 135 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 WNT10BO00744 389 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 DPH6Q7L8W6 267 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 FRMD4BQ9Y2L6 1034 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 KDM3AQ9Y4C1 1321 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 TNFAIP3P21580 790 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 APBA1Q02410 837 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 TROAPQ12815 778 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 ARHGAP44Q17R89 818 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 WDR93Q6P2C0 686 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 VGLL2Q8N8G2 317 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 CDHR1Q96JP9 859 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 COL4A3BPQ9Y5P4 624 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 DDTLA6NHG4 134 aaPredicted RBP17.76■□□□□ 0.43
LSS-205ENST00000457828 FOXP2O15409 715 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 GCFC2P16383 781 aaKnown RBP17.76■□□□□ 0.43
LSS-205ENST00000457828 RDH13Q8NBN7 331 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 TRIM9Q9C026 710 aa17.76■□□□□ 0.43
LSS-205ENST00000457828 DMGDHQ9UI17 866 aaKnown RBP17.76■□□□□ 0.43
LSS-205ENST00000457828 FAM237AA0A1B0GTK4 181 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 E2F5Q15329 346 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 GPC2Q8N158 579 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 MGARPQ8TDB4 240 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 H2AFZP0C0S5 128 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 CCND2P30279 289 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 GKAP1Q5VSY0 366 aaPredicted RBP17.75■□□□□ 0.43
LSS-205ENST00000457828 H2AFVQ71UI9 128 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 NYAP2Q9P242 653 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 PLAAQ9Y263 795 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 NR2F2P24468 414 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 SNAPC2Q13487 334 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 MTMR3Q13615 1198 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 PPP1R7Q15435 360 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 DEPTORQ8TB45 409 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 VCPKMTQ9H867 229 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 CTNND1O60716 968 aaKnown RBP17.75■□□□□ 0.43
LSS-205ENST00000457828 GJC1P36383 396 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 CORO7P57737 925 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 NRBP2Q9NSY0 501 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 NOVA2Q9UNW9 492 aaKnown RBP17.75■□□□□ 0.43
LSS-205ENST00000457828 ATP8A1Q9Y2Q0 1164 aa17.75■□□□□ 0.43
LSS-205ENST00000457828 PMS1P54277 932 aaKnown RBP17.74■□□□□ 0.43
LSS-205ENST00000457828 HERVK_113P62684 666 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 LDHDQ86WU2 507 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 DDX12PQ92771 950 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 CTTNBP2NLQ9P2B4 639 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 AMFRQ9UKV5 643 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 CCL15-CCL14A0A0B4J2E2 113 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 PRPHP41219 470 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 CALCOCO2Q13137 446 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 CCL15Q16663 113 aa17.74■□□□□ 0.43
LSS-205ENST00000457828 GJA10Q969M2 543 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms