RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 WDFY3Q8IZQ1 3526 aa18.94■□□□□ 0.62
SF3B4-202ENST00000457312 LILRB5O75023 590 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 CLASP2O75122 1294 aaKnown RBP18.93■□□□□ 0.62
SF3B4-202ENST00000457312 CT47B1P0C2W7 299 aaPredicted RBP18.93■□□□□ 0.62
SF3B4-202ENST00000457312 TDO2P48775 406 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 USH1GQ495M9 461 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 CCDC149Q6ZUS6 474 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 ERC1Q8IUD2 1116 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 PJA1Q8NG27 643 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 ATRIPQ8WXE1 791 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 FTHL17Q9BXU8 183 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 BOLA2Q9H3K6 86 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 GMEB2Q9UKD1 530 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 CDY2AQ9Y6F7 541 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 LOC400499M0QZD8 3231 aa18.93■□□□□ 0.62
SF3B4-202ENST00000457312 TBKBP1A7MCY6 615 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 LRRN2O75325 713 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 SP2Q02086 613 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 UNQ6494/PRO21346Q6UXR6 183 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 TRIM50Q86XT4 487 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 GPR20Q99678 358 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 FOXQ1Q9C009 403 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 GPCPD1Q9NPB8 672 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 DZANK1Q9NVP4 752 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 LRFN2Q9ULH4 789 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 NRCAMQ92823 1304 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 COL4A3Q01955 1670 aa18.92■□□□□ 0.62
SF3B4-202ENST00000457312 C2orf71A6NGG8 1288 aa18.91■□□□□ 0.62
SF3B4-202ENST00000457312 NR3C2P08235 984 aa18.91■□□□□ 0.62
SF3B4-202ENST00000457312 SPEM2Q0P670 501 aa18.91■□□□□ 0.62
SF3B4-202ENST00000457312 ARHGEF16Q5VV41 709 aa18.91■□□□□ 0.62
SF3B4-202ENST00000457312 TAF2Q6P1X5 1199 aa18.91■□□□□ 0.62
SF3B4-202ENST00000457312 KDF1Q8NAX2 398 aaPredicted RBP18.91■□□□□ 0.62
SF3B4-202ENST00000457312 RSAD2Q8WXG1 361 aa18.91■□□□□ 0.62
SF3B4-202ENST00000457312 CWH43Q9H720 699 aa18.91■□□□□ 0.62
SF3B4-202ENST00000457312 ARHGEF3Q9NR81 526 aa18.91■□□□□ 0.62
SF3B4-202ENST00000457312 TYW1Q9NV66 732 aaKnown RBP18.91■□□□□ 0.62
SF3B4-202ENST00000457312 PUF60Q9UHX1 559 aaKnown RBP18.91■□□□□ 0.62
SF3B4-202ENST00000457312 LAG3P18627 525 aa18.9■□□□□ 0.62
SF3B4-202ENST00000457312 NOVP48745 357 aa18.9■□□□□ 0.62
SF3B4-202ENST00000457312 TMC7Q7Z402 723 aa18.9■□□□□ 0.62
SF3B4-202ENST00000457312 GPR152Q8TDT2 470 aa18.9■□□□□ 0.62
SF3B4-202ENST00000457312 PXMP2Q9NR77 195 aa18.9■□□□□ 0.62
SF3B4-202ENST00000457312 ZSCAN32Q9NX65 697 aa18.9■□□□□ 0.62
SF3B4-202ENST00000457312 LHX6Q9UPM6 363 aa18.9■□□□□ 0.62
SF3B4-202ENST00000457312 BPTFQ12830 3046 aa18.89■□□□□ 0.61
SF3B4-202ENST00000457312 TBC1D4O60343 1298 aa18.89■□□□□ 0.61
SF3B4-202ENST00000457312 SRFP11831 508 aa18.89■□□□□ 0.61
SF3B4-202ENST00000457312 IBSPP21815 317 aaPredicted RBP18.89■□□□□ 0.61
SF3B4-202ENST00000457312 RING1Q06587 406 aa18.89■□□□□ 0.61
SF3B4-202ENST00000457312 SMC1AQ14683 1233 aaKnown RBP18.89■□□□□ 0.61
SF3B4-202ENST00000457312 DDX1Q92499 740 aaKnown RBP18.89■□□□□ 0.61
SF3B4-202ENST00000457312 NELL1Q92832 810 aa18.89■□□□□ 0.61
SF3B4-202ENST00000457312 GPKOWQ92917 476 aaPredicted RBP eCLIP18.89■□□□□ 0.61
SF3B4-202ENST00000457312 MAF1Q9H063 256 aa18.89■□□□□ 0.61
SF3B4-202ENST00000457312 SPATA6Q9NWH7 488 aaPredicted RBP18.89■□□□□ 0.61
SF3B4-202ENST00000457312 ITPR1Q14643 2758 aa18.88■□□□□ 0.61
SF3B4-202ENST00000457312 LAMTOR5O43504 91 aa18.88■□□□□ 0.61
SF3B4-202ENST00000457312 N4BP1O75113 896 aaKnown RBP18.88■□□□□ 0.61
SF3B4-202ENST00000457312 SARSP49591 514 aaKnown RBP18.88■□□□□ 0.61
SF3B4-202ENST00000457312 CSTF1Q05048 431 aaKnown RBP18.88■□□□□ 0.61
SF3B4-202ENST00000457312 ZSCAN25Q6NSZ9 544 aa18.88■□□□□ 0.61
SF3B4-202ENST00000457312 KCNV1Q6PIU1 500 aa18.88■□□□□ 0.61
SF3B4-202ENST00000457312 TMC5Q6UXY8 1006 aa18.88■□□□□ 0.61
SF3B4-202ENST00000457312 RSPH3Q86UC2 560 aa18.88■□□□□ 0.61
SF3B4-202ENST00000457312 MRPL43Q8N983 215 aaKnown RBP18.88■□□□□ 0.61
SF3B4-202ENST00000457312 RHPN1Q8TCX5 695 aa18.88■□□□□ 0.61
SF3B4-202ENST00000457312 CLUAP1Q96AJ1 413 aa18.88■□□□□ 0.61
SF3B4-202ENST00000457312 BCAS3Q9H6U6 928 aa18.88■□□□□ 0.61
SF3B4-202ENST00000457312 MLXIPQ9HAP2 919 aa18.88■□□□□ 0.61
SF3B4-202ENST00000457312 LAMA4Q16363 1823 aa18.88■□□□□ 0.61
SF3B4-202ENST00000457312 TSPY2A6NKD2 308 aa18.87■□□□□ 0.61
SF3B4-202ENST00000457312 TAF4O00268 1085 aa18.87■□□□□ 0.61
SF3B4-202ENST00000457312 EPCAMP16422 314 aa18.87■□□□□ 0.61
SF3B4-202ENST00000457312 PDE4AP27815 886 aa18.87■□□□□ 0.61
SF3B4-202ENST00000457312 MRPS6P82932 125 aaKnown RBP18.87■□□□□ 0.61
SF3B4-202ENST00000457312 FAM102BQ5T8I3 360 aa18.87■□□□□ 0.61
SF3B4-202ENST00000457312 DNAJB3Q8WWF6 145 aa18.87■□□□□ 0.61
SF3B4-202ENST00000457312 OSBP2Q969R2 916 aa18.87■□□□□ 0.61
SF3B4-202ENST00000457312 USP26Q9BXU7 913 aa18.87■□□□□ 0.61
SF3B4-202ENST00000457312 TMX1Q9H3N1 280 aa18.87■□□□□ 0.61
SF3B4-202ENST00000457312 PADI3Q9ULW8 664 aa18.87■□□□□ 0.61
SF3B4-202ENST00000457312 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.87■□□□□ 0.61
SF3B4-202ENST00000457312 DMXL2Q8TDJ6 3036 aa18.87■□□□□ 0.61
SF3B4-202ENST00000457312 MYH15Q9Y2K3 1946 aa18.86■□□□□ 0.61
SF3B4-202ENST00000457312 GDF9O60383 454 aa18.86■□□□□ 0.61
SF3B4-202ENST00000457312 GPR149Q86SP6 731 aa18.86■□□□□ 0.61
SF3B4-202ENST00000457312 TRMT2AQ8IZ69 625 aaKnown RBP18.86■□□□□ 0.61
SF3B4-202ENST00000457312 TMEM57Q8N5G2 664 aa18.86■□□□□ 0.61
SF3B4-202ENST00000457312 ZNF215Q9UL58 517 aaPredicted RBP18.86■□□□□ 0.61
SF3B4-202ENST00000457312 PCDHB7Q9Y5E2 793 aa18.86■□□□□ 0.61
SF3B4-202ENST00000457312 SQORQ9Y6N5 450 aa18.86■□□□□ 0.61
SF3B4-202ENST00000457312 IGSF10Q6WRI0 2623 aa18.85■□□□□ 0.61
SF3B4-202ENST00000457312 SRRM3A6NNA2 597 aaPredicted RBP18.85■□□□□ 0.61
SF3B4-202ENST00000457312 NOP56O00567 594 aaKnown RBP18.85■□□□□ 0.61
SF3B4-202ENST00000457312 GPAA1O43292 621 aa18.85■□□□□ 0.61
SF3B4-202ENST00000457312 IFIT2P09913 472 aaKnown RBP18.85■□□□□ 0.61
SF3B4-202ENST00000457312 PDHBP11177 359 aa18.85■□□□□ 0.61
SF3B4-202ENST00000457312 ATP5JP18859 108 aa18.85■□□□□ 0.61
SF3B4-202ENST00000457312 PBX3P40426 434 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms