RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 DNAJB3Q8WWF6 145 aa20.39■□□□□ 0.85
PDLIM2-215ENST00000456545 FAM20AQ96MK3 541 aa20.39■□□□□ 0.85
PDLIM2-215ENST00000456545 FAM161BQ96MY7 647 aa20.39■□□□□ 0.85
PDLIM2-215ENST00000456545 FAM49AQ9H0Q0 323 aaPredicted RBP20.39■□□□□ 0.85
PDLIM2-215ENST00000456545 MAFBQ9Y5Q3 323 aaPredicted RBP20.39■□□□□ 0.85
PDLIM2-215ENST00000456545 MYH9P35579 1960 aaKnown RBP20.39■□□□□ 0.85
PDLIM2-215ENST00000456545 TANC1Q9C0D5 1861 aa20.39■□□□□ 0.85
PDLIM2-215ENST00000456545 RANBP2P49792 3224 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 SLC37A4O43826 429 aa20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 PSMD10O75832 226 aa20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 CXCL10P02778 98 aa20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 KLRC1P26715 233 aa20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 RAB30Q15771 203 aa20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 EARS2Q5JPH6 523 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 MARCH8Q5T0T0 291 aa20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 RDM1Q8NG50 284 aa20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 BBXQ8WY36 941 aaPredicted RBP20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 VWCEQ96DN2 955 aa20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 FAM167AQ96KS9 214 aa20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 BACH2Q9BYV9 841 aa20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 CEP131Q9UPN4 1083 aa20.38■□□□□ 0.85
PDLIM2-215ENST00000456545 ABHD14A-ACY1A0A1B0GW23 586 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 MBLAC1A4D2B0 266 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 FAM205CA6NFA0 338 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 KIF28PB7ZC32 967 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 EFCAB14O75071 495 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 ATP2B1P20020 1258 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 DNAJB2P25686 324 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 GPNMBQ14956 572 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 IER5Q5VY09 327 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 MTHFD1LQ6UB35 978 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 ETNPPLQ8TBG4 499 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 SEPT8Q92599 483 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 TIFAQ96CG3 184 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 TMX3Q96JJ7 454 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 SLC9A7Q96T83 725 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 PCDHA2Q9Y5H9 948 aa20.37■□□□□ 0.85
PDLIM2-215ENST00000456545 COL1A2P08123 1366 aa20.36■□□□□ 0.85
PDLIM2-215ENST00000456545 TBX3O15119 743 aa20.36■□□□□ 0.85
PDLIM2-215ENST00000456545 TRAF7Q6Q0C0 670 aa20.36■□□□□ 0.85
PDLIM2-215ENST00000456545 RPAINQ86UA6 219 aa20.36■□□□□ 0.85
PDLIM2-215ENST00000456545 SLFN12Q8IYM2 578 aa20.36■□□□□ 0.85
PDLIM2-215ENST00000456545 DBF4BQ8NFT6 615 aa20.36■□□□□ 0.85
PDLIM2-215ENST00000456545 PHOSPHO2Q8TCD6 241 aa20.36■□□□□ 0.85
PDLIM2-215ENST00000456545 TNFRSF25Q93038 417 aa20.36■□□□□ 0.85
PDLIM2-215ENST00000456545 ZBTB10Q96DT7 871 aa20.36■□□□□ 0.85
PDLIM2-215ENST00000456545 ZBED2Q9BTP6 218 aa20.36■□□□□ 0.85
PDLIM2-215ENST00000456545 PBX4Q9BYU1 374 aa20.36■□□□□ 0.85
PDLIM2-215ENST00000456545 SMIM35A0A1B0GVV1 85 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 ATP4AP20648 1035 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 PBX2P40425 430 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 RABGGTBP53611 331 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 MBTPS1Q14703 1052 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 FAM26DQ5JW98 314 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 POTEDQ86YR6 584 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 NME8Q8N427 588 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 METTL13Q8N6R0 699 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 FBXO18Q8NFZ0 1043 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 SEMA6BQ9H3T3 888 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 CDY2AQ9Y6F7 541 aa20.35■□□□□ 0.85
PDLIM2-215ENST00000456545 CHRNA1P02708 482 aa20.34■□□□□ 0.85
PDLIM2-215ENST00000456545 OATP04181 439 aa20.34■□□□□ 0.85
PDLIM2-215ENST00000456545 MRPS6P82932 125 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-215ENST00000456545 TMEM62Q0P6H9 643 aa20.34■□□□□ 0.85
PDLIM2-215ENST00000456545 CALCRLQ16602 461 aa20.34■□□□□ 0.85
PDLIM2-215ENST00000456545 PLEKHG4Q58EX7 1191 aa20.34■□□□□ 0.85
PDLIM2-215ENST00000456545 TET1Q8NFU7 2136 aa20.34■□□□□ 0.85
PDLIM2-215ENST00000456545 FOXP1Q9H334 677 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-215ENST00000456545 SLC28A3Q9HAS3 691 aa20.34■□□□□ 0.85
PDLIM2-215ENST00000456545 KCNMB3Q9NPA1 279 aa20.34■□□□□ 0.85
PDLIM2-215ENST00000456545 MTMR10Q9NXD2 777 aa20.34■□□□□ 0.85
PDLIM2-215ENST00000456545 TMEM265A0A087WTH1 108 aa20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 MAGEB2O15479 319 aa20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 DKC1O60832 514 aaKnown RBP eCLIP20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 WDR5P61964 334 aaKnown RBP20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 PRKCEQ02156 737 aa20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 NCAPH2Q6IBW4 605 aa20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 APBB2Q92870 758 aa20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 IFIH1Q9BYX4 1025 aaKnown RBP20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 NKX2-4Q9H2Z4 354 aa20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 ZNF576Q9H609 170 aa20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 PCDHA12Q9UN75 941 aa20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 SMC3Q9UQE7 1217 aa20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 PCDHA11Q9Y5I1 949 aa20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 TRPV2Q9Y5S1 764 aa20.33■□□□□ 0.85
PDLIM2-215ENST00000456545 IGSF9BQ9UPX0 1349 aa20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 DDX11L8A8MPP1 907 aa20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 NEMFO60524 1076 aa20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 CD2BP2O95400 341 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 AMHP03971 560 aa20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 GHRP10912 638 aa20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 TMOD1P28289 359 aa20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 PPP2R5CQ13362 524 aa20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 HERC6Q8IVU3 1022 aa20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 BANK1Q8NDB2 785 aa20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 SEPT9Q9UHD8 586 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 NOL7Q9UMY1 257 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 GINS2Q9Y248 185 aa20.32■□□□□ 0.84
PDLIM2-215ENST00000456545 H3BQV1 296 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms