RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 WDR64B1ANS9 1081 aa17.59■□□□□ 0.41
SNX17-204ENST00000453453 ATP9AO75110 1047 aa17.59■□□□□ 0.41
SNX17-204ENST00000453453 ECM2O94769 699 aaPredicted RBP17.59■□□□□ 0.41
SNX17-204ENST00000453453 MUTP22033 750 aa17.59■□□□□ 0.41
SNX17-204ENST00000453453 PLA2G4AP47712 749 aa17.59■□□□□ 0.41
SNX17-204ENST00000453453 AMPD3Q01432 767 aa17.59■□□□□ 0.41
SNX17-204ENST00000453453 NEDD9Q14511 834 aa17.59■□□□□ 0.41
SNX17-204ENST00000453453 MAMDC4Q6UXC1 1216 aa17.59■□□□□ 0.41
SNX17-204ENST00000453453 EEPD1Q7L9B9 569 aa17.59■□□□□ 0.41
SNX17-204ENST00000453453 PAGE5Q96GU1 130 aa17.59■□□□□ 0.41
SNX17-204ENST00000453453 PNMA5Q96PV4 448 aa17.59■□□□□ 0.41
SNX17-204ENST00000453453 LRRC27Q9C0I9 530 aa17.59■□□□□ 0.41
SNX17-204ENST00000453453 JPH1Q9HDC5 661 aaPredicted RBP17.59■□□□□ 0.41
SNX17-204ENST00000453453 SYNGAP1Q96PV0 1343 aa17.58■□□□□ 0.41
SNX17-204ENST00000453453 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.58■□□□□ 0.41
SNX17-204ENST00000453453 EML1O00423 815 aa17.58■□□□□ 0.41
SNX17-204ENST00000453453 ARHGAP6O43182 974 aa17.58■□□□□ 0.41
SNX17-204ENST00000453453 AFMP43652 599 aa17.58■□□□□ 0.41
SNX17-204ENST00000453453 TUBB4BP68371 445 aa17.58■□□□□ 0.41
SNX17-204ENST00000453453 LACTBP83111 547 aaPredicted RBP17.58■□□□□ 0.41
SNX17-204ENST00000453453 GPS2Q13227 327 aa17.58■□□□□ 0.41
SNX17-204ENST00000453453 B3GNT9Q6UX72 402 aa17.58■□□□□ 0.41
SNX17-204ENST00000453453 GPR161Q8N6U8 529 aaKnown RBP17.58■□□□□ 0.41
SNX17-204ENST00000453453 SCFD2Q8WU76 684 aa17.58■□□□□ 0.41
SNX17-204ENST00000453453 SLC9A2Q9UBY0 812 aa17.58■□□□□ 0.41
SNX17-204ENST00000453453 KIAA1024Q9UPX6 916 aa17.58■□□□□ 0.41
SNX17-204ENST00000453453 DOCK3Q8IZD9 2030 aa17.58■□□□□ 0.41
SNX17-204ENST00000453453 POTEB3A0JP26 581 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 MED24O75448 989 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 TRPA1O75762 1119 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 TBC1D8O95759 1140 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 MYL1P05976 194 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 HOXC6P09630 235 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 HTRA3P83110 453 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 MYL5Q02045 173 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 CYP4A11Q02928 519 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 PNOCQ13519 176 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 TTLL4Q14679 1199 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 NAALADL2Q58DX5 795 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 TRIM65Q6PJ69 517 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 POTEBQ6S5H4 581 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 SV2BQ7L1I2 683 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 CATSPER3Q86XQ3 398 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 FBXO16Q8IX29 292 aaPredicted RBP17.58■□□□□ 0.4
SNX17-204ENST00000453453 LARP4BQ92615 738 aaKnown RBP17.58■□□□□ 0.4
SNX17-204ENST00000453453 RAD54LQ92698 747 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 SMARCE1Q969G3 411 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 APBA2Q99767 749 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 TINF2Q9BSI4 451 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 RNF186Q9NXI6 227 aa17.58■□□□□ 0.4
SNX17-204ENST00000453453 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.58■□□□□ 0.4
SNX17-204ENST00000453453 GTPBP6O43824 516 aaPredicted RBP17.57■□□□□ 0.4
SNX17-204ENST00000453453 P4HBP07237 508 aaKnown RBP17.57■□□□□ 0.4
SNX17-204ENST00000453453 UBA1P22314 1058 aaKnown RBP17.57■□□□□ 0.4
SNX17-204ENST00000453453 PSMC4P43686 418 aa17.57■□□□□ 0.4
SNX17-204ENST00000453453 SP3Q02447 781 aa17.57■□□□□ 0.4
SNX17-204ENST00000453453 SH3RF1Q7Z6J0 888 aa17.57■□□□□ 0.4
SNX17-204ENST00000453453 TPH2Q8IWU9 490 aa17.57■□□□□ 0.4
SNX17-204ENST00000453453 NPLOC4Q8TAT6 608 aa17.57■□□□□ 0.4
SNX17-204ENST00000453453 DYDC2Q96IM9 177 aa17.57■□□□□ 0.4
SNX17-204ENST00000453453 PSD3Q9NYI0 1048 aa17.57■□□□□ 0.4
SNX17-204ENST00000453453 DNM3Q9UQ16 869 aa17.57■□□□□ 0.4
SNX17-204ENST00000453453 POTEFA5A3E0 1075 aa17.56■□□□□ 0.4
SNX17-204ENST00000453453 DKC1O60832 514 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNX17-204ENST00000453453 SPATA31C1P0DKV0 1188 aa17.56■□□□□ 0.4
SNX17-204ENST00000453453 MDM2Q00987 491 aaPredicted RBP17.56■□□□□ 0.4
SNX17-204ENST00000453453 POTEGQ6S5H5 508 aa17.56■□□□□ 0.4
SNX17-204ENST00000453453 VSTM4Q8IW00 320 aa17.56■□□□□ 0.4
SNX17-204ENST00000453453 GRAMD1CQ8IYS0 662 aa17.56■□□□□ 0.4
SNX17-204ENST00000453453 USP6NLQ92738 828 aa17.56■□□□□ 0.4
SNX17-204ENST00000453453 HSD17B14Q9BPX1 270 aa17.56■□□□□ 0.4
SNX17-204ENST00000453453 ABHD16BQ9H3Z7 469 aa17.56■□□□□ 0.4
SNX17-204ENST00000453453 RGL1Q9NZL6 768 aa17.56■□□□□ 0.4
SNX17-204ENST00000453453 PCDHA10Q9Y5I2 948 aa17.56■□□□□ 0.4
SNX17-204ENST00000453453 FOXN1O15353 648 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 PSAPP07602 524 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 CDK11BP21127 795 aaKnown RBP17.55■□□□□ 0.4
SNX17-204ENST00000453453 IRX5P78411 483 aaPredicted RBP17.55■□□□□ 0.4
SNX17-204ENST00000453453 TUBB2AQ13885 445 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 CTTNQ14247 550 aaKnown RBP17.55■□□□□ 0.4
SNX17-204ENST00000453453 MIS18BP1Q6P0N0 1132 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 CYFIP1Q7L576 1253 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 REXO1L1PQ8IX06 675 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 CCDC47Q96A33 483 aaKnown RBP17.55■□□□□ 0.4
SNX17-204ENST00000453453 LXNQ9BS40 222 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 TUBB2BQ9BVA1 445 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 ZSWIM4Q9H7M6 989 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 MLXIPQ9HAP2 919 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 BLOC1S4Q9NUP1 217 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 KBTBD4Q9NVX7 518 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 WDR81Q562E7 1941 aa17.55■□□□□ 0.4
SNX17-204ENST00000453453 SLITRK3O94933 977 aa17.54■□□□□ 0.4
SNX17-204ENST00000453453 GGPS1O95749 300 aa17.54■□□□□ 0.4
SNX17-204ENST00000453453 CCNE2O96020 404 aa17.54■□□□□ 0.4
SNX17-204ENST00000453453 TXNP10599 105 aaKnown RBP17.54■□□□□ 0.4
SNX17-204ENST00000453453 CYP2B6P20813 491 aa17.54■□□□□ 0.4
SNX17-204ENST00000453453 QARSP47897 775 aaKnown RBP17.54■□□□□ 0.4
SNX17-204ENST00000453453 C1QTNF8P60827 252 aa17.54■□□□□ 0.4
SNX17-204ENST00000453453 SP2Q02086 613 aa17.54■□□□□ 0.4
SNX17-204ENST00000453453 SP4Q02446 784 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms