RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
TRA2B-205ENST00000453386 PABPC4Q13310 644 aaKnown RBP eCLIP17.18■□□□□ 0.347e-8■□□□□ 9.8
TRA2B-205ENST00000453386 PPP1R18Q6NYC8 613 aa17.18■□□□□ 0.34
TRA2B-205ENST00000453386 RUFY4Q6ZNE9 571 aa17.18■□□□□ 0.34
TRA2B-205ENST00000453386 SLF2Q8IX21 1173 aa17.18■□□□□ 0.34
TRA2B-205ENST00000453386 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
TRA2B-205ENST00000453386 CYFIP2Q96F07 1278 aa17.18■□□□□ 0.34
TRA2B-205ENST00000453386 DHX36Q9H2U1 1008 aaKnown RBP17.18■□□□□ 0.34
TRA2B-205ENST00000453386 H0YGN5 161 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 H2AFZP0C0S5 128 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 SNHG28P0DPA3 235 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 SWT1Q5T5J6 900 aaKnown RBP17.17■□□□□ 0.34
TRA2B-205ENST00000453386 H2AFVQ71UI9 128 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 YTHDF3Q7Z739 585 aaKnown RBP17.17■□□□□ 0.34
TRA2B-205ENST00000453386 VPS36Q86VN1 386 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 AMIGO3Q86WK7 504 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 NFS1Q9Y697 457 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 GMNCA6NCL1 334 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 F8W031 263 aaPredicted RBP17.17■□□□□ 0.34
TRA2B-205ENST00000453386 BACH1O14867 736 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 ZBTB5O15062 677 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 FRMD5Q7Z6J6 570 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 EIF1ADQ8N9N8 165 aaKnown RBP17.17■□□□□ 0.34
TRA2B-205ENST00000453386 U2AF1L4Q8WU68 220 aaKnown RBP17.17■□□□□ 0.34
TRA2B-205ENST00000453386 LMBR1Q8WVP7 490 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 TRIM31Q9BZY9 425 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 DPH5Q9H2P9 285 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 YY1AP1Q9H869 796 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 NOVA2Q9UNW9 492 aaKnown RBP17.17■□□□□ 0.34
TRA2B-205ENST00000453386 SPATA31A5Q5VU36 1347 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 SPATA31A7Q8IWB4 1347 aa17.17■□□□□ 0.34
TRA2B-205ENST00000453386 RGL2O15211 777 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 PSMC6P62333 389 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 KNOP1Q1ED39 458 aaKnown RBP17.16■□□□□ 0.34
TRA2B-205ENST00000453386 GJB7Q6PEY0 223 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 SFR1Q86XK3 245 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 CALR3Q96L12 384 aaKnown RBP17.16■□□□□ 0.34
TRA2B-205ENST00000453386 CELF4Q9BZC1 486 aaKnown RBP17.16■□□□□ 0.34
TRA2B-205ENST00000453386 DDX60LQ5H9U9 1706 aaKnown RBP17.16■□□□□ 0.34
TRA2B-205ENST00000453386 TTI1O43156 1089 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 SLC12A3P55017 1021 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 FAM98CQ17RN3 349 aaKnown RBP17.16■□□□□ 0.34
TRA2B-205ENST00000453386 CCDC121Q6ZUS5 278 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 GPATCH11Q8N954 259 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 CCDC26Q8TAB7 109 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 RPGRQ92834 1020 aaKnown RBP17.16■□□□□ 0.34
TRA2B-205ENST00000453386 PAGR1Q9BTK6 254 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 AKAP3O75969 853 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 BIRC3Q13489 604 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 CCDC91Q7Z6B0 441 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 CNBD1Q8NA66 436 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 GGA1Q9UJY5 639 aa17.16■□□□□ 0.34
TRA2B-205ENST00000453386 CCDC188H7C350 402 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 DHX9Q08211 1270 aaKnown RBP17.15■□□□□ 0.34
TRA2B-205ENST00000453386 GIT2Q14161 759 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 CATSPER3Q86XQ3 398 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 ZC3H3Q8IXZ2 948 aaKnown RBP17.15■□□□□ 0.34
TRA2B-205ENST00000453386 DNM3Q9UQ16 869 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 DAGLAQ9Y4D2 1042 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 CLIC2O15247 247 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 CALUO43852 315 aaPredicted RBP17.15■□□□□ 0.34
TRA2B-205ENST00000453386 RFC4P35249 363 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 PRPF4BQ13523 1007 aaKnown RBP17.15■□□□□ 0.34
TRA2B-205ENST00000453386 MTMR3Q13615 1198 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 KRT71Q3SY84 523 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 PRR16Q569H4 304 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 DPY19L2P1Q6NXN4 242 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 CCDC13Q8IYE1 715 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 NAP1L4Q99733 375 aaKnown RBP17.15■□□□□ 0.34
TRA2B-205ENST00000453386 REEP2Q9BRK0 252 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 GCNT4Q9P109 453 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 AJAP1Q9UKB5 411 aaPredicted RBP17.15■□□□□ 0.34
TRA2B-205ENST00000453386 PCDHB13Q9Y5F0 798 aa17.15■□□□□ 0.34
TRA2B-205ENST00000453386 PITPNM2Q9BZ72 1349 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 GOLGA6L7A0A1B0GV03 622 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 GFPT2O94808 682 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 CASP4P49662 377 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 MAGOHP61326 146 aaKnown RBP17.14■□□□□ 0.33
TRA2B-205ENST00000453386 PPP2R2AP63151 447 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 ACTN3Q08043 901 aaPredicted RBP17.14■□□□□ 0.33
TRA2B-205ENST00000453386 IFFO1Q0D2I5 559 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 RC3H1Q5TC82 1133 aaKnown RBP17.14■□□□□ 0.33
TRA2B-205ENST00000453386 MAGOHBQ96A72 148 aaKnown RBP17.14■□□□□ 0.33
TRA2B-205ENST00000453386 FAM163AQ96GL9 167 aaPredicted RBP17.14■□□□□ 0.33
TRA2B-205ENST00000453386 NCAPGQ9BPX3 1015 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 DDX20Q9UHI6 824 aaKnown RBP17.14■□□□□ 0.33
TRA2B-205ENST00000453386 SLC12A6Q9UHW9 1150 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 TRAF3IP3Q9Y228 551 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 UTP11Q9Y3A2 253 aaKnown RBP17.14■□□□□ 0.33
TRA2B-205ENST00000453386 PCDHA1Q9Y5I3 950 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
TRA2B-205ENST00000453386 FRMD3A2A2Y4 597 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 EPHA7Q15375 998 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 GPATCH4Q5T3I0 446 aaKnown RBP17.14■□□□□ 0.33
TRA2B-205ENST00000453386 ADAT2Q7Z6V5 191 aaKnown RBP17.14■□□□□ 0.33
TRA2B-205ENST00000453386 CCDC114Q96M63 670 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 ANO3Q9BYT9 981 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 VCPKMTQ9H867 229 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 KCNMB3Q9NPA1 279 aa17.14■□□□□ 0.33
TRA2B-205ENST00000453386 CNOT8Q9UFF9 292 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms