RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 ARVCFO00192 962 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 SLC26A4O43511 780 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 CUTAO60888 179 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 MED24O75448 989 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 OATP04181 439 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 SPATA31C1P0DKV0 1188 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 CCT6AP40227 531 aaKnown RBP13.32□□□□□ -0.28
LINC00339-205ENST00000452322 ME1P48163 572 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 PTPN11Q06124 597 aaPredicted RBP13.32□□□□□ -0.28
LINC00339-205ENST00000452322 CTTNQ14247 550 aaKnown RBP13.32□□□□□ -0.28
LINC00339-205ENST00000452322 SNX17Q15036 470 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 XKR3Q5GH77 459 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 SLC39A5Q6ZMH5 540 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 CATSPER3Q86XQ3 398 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 CKAP2LQ8IYA6 745 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 C7orf31Q8N865 590 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
LINC00339-205ENST00000452322 BBXQ8WY36 941 aaPredicted RBP13.32□□□□□ -0.28
LINC00339-205ENST00000452322 CLIC6Q96NY7 704 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 MMTAG2Q9BU76 263 aaKnown RBP13.32□□□□□ -0.28
LINC00339-205ENST00000452322 WRAP73Q9P2S5 460 aaPredicted RBP13.32□□□□□ -0.28
LINC00339-205ENST00000452322 TRPC6Q9Y210 931 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 KDM3AQ9Y4C1 1321 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 HBP1O60381 514 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 SMIM10L2AP0DMW4 78 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 SMIM10L2BP0DMW5 78 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 CDC25AP30304 524 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 HOXC8P31273 242 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 UBA7P41226 1012 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 CDK7P50613 346 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 CHMP4BP1P59074 171 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 HYIQ5T013 277 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 AXDND1Q5T1B0 1012 aaPredicted RBP13.32□□□□□ -0.28
LINC00339-205ENST00000452322 CABP7Q86V35 215 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 TPH2Q8IWU9 490 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 KCTD17Q8N5Z5 321 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 CCSER1Q9C0I3 900 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 NRBP2Q9NSY0 501 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 HDAC6Q9UBN7 1215 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 GTF2IRD1Q9UHL9 959 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 PCDHA7Q9UN72 937 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 MROH7Q68CQ1 1323 aa13.31□□□□□ -0.28
LINC00339-205ENST00000452322 NRCAMQ92823 1304 aa13.31□□□□□ -0.28
LINC00339-205ENST00000452322 COL1A2P08123 1366 aa13.31□□□□□ -0.28
LINC00339-205ENST00000452322 STBD1O95210 358 aa13.31□□□□□ -0.28
LINC00339-205ENST00000452322 YWHABP31946 246 aaKnown RBP13.31□□□□□ -0.28
LINC00339-205ENST00000452322 TXLNAP40222 546 aa13.31□□□□□ -0.28
LINC00339-205ENST00000452322 ATN1P54259 1190 aaPredicted RBP13.31□□□□□ -0.28
LINC00339-205ENST00000452322 PPFIA1Q13136 1202 aa13.31□□□□□ -0.28
LINC00339-205ENST00000452322 FAM47CQ5HY64 1035 aa13.31□□□□□ -0.28
LINC00339-205ENST00000452322 ZNF484Q5JVG2 852 aa13.31□□□□□ -0.28
LINC00339-205ENST00000452322 SYMPKQ92797 1274 aaKnown RBP13.31□□□□□ -0.28
LINC00339-205ENST00000452322 NIFKQ9BYG3 293 aaKnown RBP13.31□□□□□ -0.28
LINC00339-205ENST00000452322 NT5C3AQ9H0P0 336 aa13.31□□□□□ -0.28
LINC00339-205ENST00000452322 GDPD2Q9HCC8 539 aa13.31□□□□□ -0.28
LINC00339-205ENST00000452322 SEPT9Q9UHD8 586 aaPredicted RBP13.31□□□□□ -0.28
LINC00339-205ENST00000452322 C17orf102A2RUQ5 167 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 RRN3P2A6NIE6 340 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 GNAT1P11488 350 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 XRCC6P12956 609 aaKnown RBP eCLIP13.3□□□□□ -0.28
LINC00339-205ENST00000452322 INSRRP14616 1297 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 GRIK4Q16099 956 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 ECM1Q16610 540 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 CSPP1Q1MSJ5 1256 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 SPECC1Q5M775 1068 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 ADALQ6DHV7 355 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 POTEGQ6S5H5 508 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 SHC4Q6S5L8 630 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 CLEC17AQ6ZS10 378 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 USP49Q70CQ1 688 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 ANO5Q75V66 913 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 OTUD6AQ7L8S5 288 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 ANKRD33Q7Z3H0 272 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 PPP1R13LQ8WUF5 828 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 LMBR1Q8WVP7 490 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 CALML4Q96GE6 196 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 EPSTI1Q96J88 318 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 CDK5RAP3Q96JB5 506 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 TOX2Q96NM4 488 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 NACC1Q96RE7 527 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 ANKEF1Q9NU02 776 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 DDX19AQ9NUU7 478 aaKnown RBP13.3□□□□□ -0.28
LINC00339-205ENST00000452322 KIAA1024Q9UPX6 916 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 PPME1Q9Y570 386 aa13.3□□□□□ -0.28
LINC00339-205ENST00000452322 DDX11L8A8MPP1 907 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 ZBTB42B2RXF5 422 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 RTP1P59025 263 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 ADAM17P78536 824 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 GRB10Q13322 594 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 TARBP2Q15633 366 aaKnown RBP13.29□□□□□ -0.28
LINC00339-205ENST00000452322 LRRC26Q2I0M4 334 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 TRIM60Q495X7 471 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 TMEM119Q4V9L6 283 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 GDF6Q6KF10 455 aaPredicted RBP13.29□□□□□ -0.28
LINC00339-205ENST00000452322 TRMT1LQ7Z2T5 733 aaKnown RBP13.29□□□□□ -0.28
LINC00339-205ENST00000452322 FAM126BQ8IXS8 530 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 PNMA5Q96PV4 448 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 HTATIP2Q9BUP3 242 aa13.29□□□□□ -0.28
LINC00339-205ENST00000452322 SETD4Q9NVD3 440 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms