RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 MYL3P08590 195 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 CMA1P23946 247 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 CDC25AP30304 524 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 ACLYP53396 1101 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 UTP14CQ5TAP6 766 aaKnown RBP12.98□□□□□ -0.33
SCN9A-204ENST00000452182 SHC4Q6S5L8 630 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 CABP7Q86V35 215 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 SNX29Q8TEQ0 813 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 SYMPKQ92797 1274 aaKnown RBP12.98□□□□□ -0.33
SCN9A-204ENST00000452182 GLG1Q92896 1179 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 DYDC2Q96IM9 177 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 EPSTI1Q96J88 318 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 NT5C3AQ9H0P0 336 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 TUT1Q9H6E5 874 aaKnown RBP12.98□□□□□ -0.33
SCN9A-204ENST00000452182 RGL1Q9NZL6 768 aa12.98□□□□□ -0.33
SCN9A-204ENST00000452182 LOXHD1Q8IVV2 1947 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 FAM237AA0A1B0GTK4 181 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 ZNF862O60290 1169 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 MED24O75448 989 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 ZNF286BP0CG31 522 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 XRCC6P12956 609 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCN9A-204ENST00000452182 TXLNAP40222 546 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 CCT6AP40227 531 aaKnown RBP12.97□□□□□ -0.33
SCN9A-204ENST00000452182 UGCGQ16739 394 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 RESP18Q5W5W9 173 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 PDXDC2PQ6P474 469 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 CXCL17Q6UXB2 119 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 TRIM50Q86XT4 487 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 BANK1Q8NDB2 785 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 ABHD8Q96I13 439 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 FAM167AQ96KS9 214 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 GLT1D1Q96MS3 346 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 SEZ6LQ9BYH1 1024 aa12.97□□□□□ -0.33
SCN9A-204ENST00000452182 ATP4AP20648 1035 aa12.96□□□□□ -0.33
SCN9A-204ENST00000452182 CYP4A11Q02928 519 aa12.96□□□□□ -0.33
SCN9A-204ENST00000452182 CTTNQ14247 550 aaKnown RBP12.96□□□□□ -0.33
SCN9A-204ENST00000452182 XKR3Q5GH77 459 aa12.96□□□□□ -0.33
SCN9A-204ENST00000452182 SPECC1Q5M775 1068 aa12.96□□□□□ -0.33
SCN9A-204ENST00000452182 USP49Q70CQ1 688 aa12.96□□□□□ -0.33
SCN9A-204ENST00000452182 TPH2Q8IWU9 490 aa12.96□□□□□ -0.33
SCN9A-204ENST00000452182 ATP8B4Q8TF62 1192 aa12.96□□□□□ -0.33
SCN9A-204ENST00000452182 CALML4Q96GE6 196 aa12.96□□□□□ -0.33
SCN9A-204ENST00000452182 WRAP73Q9P2S5 460 aaPredicted RBP12.96□□□□□ -0.33
SCN9A-204ENST00000452182 CCDC39Q9UFE4 941 aa12.96□□□□□ -0.33
SCN9A-204ENST00000452182 PCDHB8Q9UN66 801 aa12.96□□□□□ -0.33
SCN9A-204ENST00000452182 PCDHB13Q9Y5F0 798 aa12.96□□□□□ -0.33
SCN9A-204ENST00000452182 A0A1W2PQ45 241 aaPredicted RBP12.95□□□□□ -0.34
SCN9A-204ENST00000452182 A0A1W2PQY0 241 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 POTEB3A0JP26 581 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 STBD1O95210 358 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 OATP04181 439 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 COL6A1P12109 1028 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 PSEN2P49810 448 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 PRKCEQ02156 737 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 GRB10Q13322 594 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 MFSD10Q14728 455 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 PLCB4Q15147 1175 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 KIAA0753Q2KHM9 967 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 TMEM119Q4V9L6 283 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 POTEBQ6S5H4 581 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 NACC1Q96RE7 527 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 NIFKQ9BYG3 293 aaKnown RBP12.95□□□□□ -0.34
SCN9A-204ENST00000452182 RNPEPQ9H4A4 650 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 NRBP2Q9NSY0 501 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 FAM13BQ9NYF5 915 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 GOLGA6L4A6NEF3 574 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 HBP1O60381 514 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 YWHABP31946 246 aaKnown RBP12.95□□□□□ -0.34
SCN9A-204ENST00000452182 ECM1Q16610 540 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 NFRKBQ6P4R8 1299 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 ANO5Q75V66 913 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 OTUD6AQ7L8S5 288 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 SESTD1Q86VW0 696 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 CKAP2LQ8IYA6 745 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 CDK5RAP3Q96JB5 506 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 PNMA5Q96PV4 448 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 PYM1Q9BRP8 204 aaKnown RBP12.95□□□□□ -0.34
SCN9A-204ENST00000452182 ANKEF1Q9NU02 776 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 DDX19AQ9NUU7 478 aaKnown RBP12.95□□□□□ -0.34
SCN9A-204ENST00000452182 DBR1Q9UK59 544 aaKnown RBP12.95□□□□□ -0.34
SCN9A-204ENST00000452182 KIAA1024Q9UPX6 916 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 HPSEQ9Y251 543 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 PPME1Q9Y570 386 aa12.95□□□□□ -0.34
SCN9A-204ENST00000452182 KIAA0100Q14667 2235 aaKnown RBP12.94□□□□□ -0.34
SCN9A-204ENST00000452182 COL1A2P08123 1366 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 ARID2Q68CP9 1835 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 DNAH12Q6ZR08 3092 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 GOLGA6L22H0YM25 854 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 MARK3P27448 753 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 HOXC8P31273 242 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 UBE2HP62256 183 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 PTPN11Q06124 597 aaPredicted RBP12.94□□□□□ -0.34
SCN9A-204ENST00000452182 KARSQ15046 597 aaKnown RBP12.94□□□□□ -0.34
SCN9A-204ENST00000452182 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 CCDC73Q6ZRK6 1079 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 SLC43A3Q8NBI5 491 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 MRPS27Q92552 414 aaKnown RBP12.94□□□□□ -0.34
SCN9A-204ENST00000452182 STARD7Q9NQZ5 370 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 DNM3Q9UQ16 869 aa12.94□□□□□ -0.34
SCN9A-204ENST00000452182 GRIN2DO15399 1336 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms