RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 FAM86B2P0C5J1 330 aa24.52■■□□□ 1.52
C9orf3-208ENST00000451893 IFNAR1P17181 557 aa24.52■■□□□ 1.52
C9orf3-208ENST00000451893 ERVK-21P61565 698 aa24.52■■□□□ 1.52
C9orf3-208ENST00000451893 PKN1Q16512 942 aa24.52■■□□□ 1.52
C9orf3-208ENST00000451893 PRR16Q569H4 304 aa24.52■■□□□ 1.52
C9orf3-208ENST00000451893 PDXDC2PQ6P474 469 aa24.52■■□□□ 1.52
C9orf3-208ENST00000451893 SPRED2Q7Z698 418 aa24.52■■□□□ 1.52
C9orf3-208ENST00000451893 TBC1D22BQ9NU19 505 aa24.52■■□□□ 1.52
C9orf3-208ENST00000451893 PRUNE2Q8WUY3 3088 aa24.52■■□□□ 1.52
C9orf3-208ENST00000451893 CYP3A4P08684 503 aa24.51■■□□□ 1.51
C9orf3-208ENST00000451893 POU3F3P20264 500 aaPredicted RBP24.51■■□□□ 1.51
C9orf3-208ENST00000451893 STK3Q13188 491 aa24.51■■□□□ 1.51
C9orf3-208ENST00000451893 TSHZ1Q6ZSZ6 1077 aa24.51■■□□□ 1.51
C9orf3-208ENST00000451893 RASGRP4Q8TDF6 673 aa24.51■■□□□ 1.51
C9orf3-208ENST00000451893 TRAPPC12Q8WVT3 735 aa24.51■■□□□ 1.51
C9orf3-208ENST00000451893 TOP1MTQ969P6 601 aa24.51■■□□□ 1.51
C9orf3-208ENST00000451893 SAMD11Q96NU1 681 aa24.51■■□□□ 1.51
C9orf3-208ENST00000451893 UPF3BQ9BZI7 483 aaKnown RBP24.51■■□□□ 1.51
C9orf3-208ENST00000451893 ZSWIM6Q9HCJ5 1215 aa24.51■■□□□ 1.51
C9orf3-208ENST00000451893 PDRG1Q9NUG6 133 aa24.51■■□□□ 1.51
C9orf3-208ENST00000451893 TRPV2Q9Y5S1 764 aa24.51■■□□□ 1.51
C9orf3-208ENST00000451893 CHD9Q3L8U1 2897 aa24.51■■□□□ 1.51
C9orf3-208ENST00000451893 RBAK-RBAKDNI3L0D1 243 aa24.5■■□□□ 1.51
C9orf3-208ENST00000451893 K7ELQ4 463 aaPredicted RBP24.5■■□□□ 1.51
C9orf3-208ENST00000451893 HBP1O60381 514 aa24.5■■□□□ 1.51
C9orf3-208ENST00000451893 TMEM62Q0P6H9 643 aa24.5■■□□□ 1.51
C9orf3-208ENST00000451893 MARCH8Q5T0T0 291 aa24.5■■□□□ 1.51
C9orf3-208ENST00000451893 TRMT1LQ7Z2T5 733 aaKnown RBP24.5■■□□□ 1.51
C9orf3-208ENST00000451893 ZBTB10Q96DT7 871 aa24.5■■□□□ 1.51
C9orf3-208ENST00000451893 LOXHD1Q8IVV2 1947 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 PSAPP07602 524 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 HTRA4P83105 476 aaPredicted RBP24.49■■□□□ 1.51
C9orf3-208ENST00000451893 MGAT3Q09327 533 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 LPIN1Q14693 890 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 PTPROQ16827 1216 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 SWSAP1Q6NVH7 229 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 C17orf80Q9BSJ5 609 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 OSBPL7Q9BZF2 842 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 SUGCTQ9HAC7 445 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 SH3GLB2Q9NR46 395 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 LMCD1Q9NZU5 365 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 COG5Q9UP83 839 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 GINS2Q9Y248 185 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 PCDHA2Q9Y5H9 948 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 NLRC5Q86WI3 1866 aa24.49■■□□□ 1.51
C9orf3-208ENST00000451893 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.48■■□□□ 1.51
C9orf3-208ENST00000451893 ATG7O95352 703 aa24.48■■□□□ 1.51
C9orf3-208ENST00000451893 DEXIO95424 95 aa24.48■■□□□ 1.51
C9orf3-208ENST00000451893 CCNE2O96020 404 aa24.48■■□□□ 1.51
C9orf3-208ENST00000451893 KRT76Q01546 638 aa24.48■■□□□ 1.51
C9orf3-208ENST00000451893 PAK2Q13177 524 aa24.48■■□□□ 1.51
C9orf3-208ENST00000451893 TOB2Q14106 344 aaPredicted RBP24.48■■□□□ 1.51
C9orf3-208ENST00000451893 NTRK3Q16288 839 aa24.48■■□□□ 1.51
C9orf3-208ENST00000451893 FBXO47Q5MNV8 452 aa24.48■■□□□ 1.51
C9orf3-208ENST00000451893 ZNF746Q6NUN9 644 aaPredicted RBP24.48■■□□□ 1.51
C9orf3-208ENST00000451893 MTHFD1LQ6UB35 978 aa24.48■■□□□ 1.51
C9orf3-208ENST00000451893 ABHD15Q6UXT9 468 aa24.48■■□□□ 1.51
C9orf3-208ENST00000451893 SMAP1Q8IYB5 467 aaPredicted RBP24.48■■□□□ 1.51
C9orf3-208ENST00000451893 ADAMTS19Q8TE59 1207 aa24.48■■□□□ 1.51
C9orf3-208ENST00000451893 ATP8B4Q8TF62 1192 aa24.48■■□□□ 1.51
C9orf3-208ENST00000451893 LARP6Q9BRS8 491 aaKnown RBP24.48■■□□□ 1.51
C9orf3-208ENST00000451893 IGLV3-22A0A075B6J6 115 aa24.47■■□□□ 1.51
C9orf3-208ENST00000451893 SMIM35A0A1B0GVV1 85 aa24.47■■□□□ 1.51
C9orf3-208ENST00000451893 CDKL5O76039 1030 aa24.47■■□□□ 1.51
C9orf3-208ENST00000451893 IBSPP21815 317 aaPredicted RBP24.47■■□□□ 1.51
C9orf3-208ENST00000451893 KLRC1P26715 233 aa24.47■■□□□ 1.51
C9orf3-208ENST00000451893 CCDC60Q8IWA6 550 aaPredicted RBP24.47■■□□□ 1.51
C9orf3-208ENST00000451893 NME8Q8N427 588 aa24.47■■□□□ 1.51
C9orf3-208ENST00000451893 FIBCD1Q8N539 461 aa24.47■■□□□ 1.51
C9orf3-208ENST00000451893 HLA-CQ95604 372 aa24.47■■□□□ 1.51
C9orf3-208ENST00000451893 ZNF274Q96GC6 653 aaPredicted RBP24.47■■□□□ 1.51
C9orf3-208ENST00000451893 FTHL17Q9BXU8 183 aa24.47■■□□□ 1.51
C9orf3-208ENST00000451893 CHD7Q9P2D1 2997 aa24.46■■□□□ 1.51
C9orf3-208ENST00000451893 COL1A2P08123 1366 aa24.46■■□□□ 1.51
C9orf3-208ENST00000451893 EVPLQ92817 2033 aa24.46■■□□□ 1.51
C9orf3-208ENST00000451893 TCF20Q9UGU0 1960 aaKnown RBP24.46■■□□□ 1.51
C9orf3-208ENST00000451893 TNFRSF10AO00220 468 aa24.46■■□□□ 1.51
C9orf3-208ENST00000451893 CD52P31358 61 aa24.46■■□□□ 1.51
C9orf3-208ENST00000451893 EVCP57679 992 aa24.46■■□□□ 1.51
C9orf3-208ENST00000451893 TFF2Q03403 129 aa24.46■■□□□ 1.51
C9orf3-208ENST00000451893 MKRN4PQ13434 485 aaPredicted RBP24.46■■□□□ 1.51
C9orf3-208ENST00000451893 ZNF484Q5JVG2 852 aa24.46■■□□□ 1.51
C9orf3-208ENST00000451893 UHRF1Q96T88 793 aaPredicted RBP24.46■■□□□ 1.51
C9orf3-208ENST00000451893 CELF4Q9BZC1 486 aaKnown RBP24.46■■□□□ 1.51
C9orf3-208ENST00000451893 PCDHA10Q9Y5I2 948 aa24.46■■□□□ 1.51
C9orf3-208ENST00000451893 LPXNO60711 386 aa24.45■■□□□ 1.5
C9orf3-208ENST00000451893 EPC2Q52LR7 807 aa24.45■■□□□ 1.5
C9orf3-208ENST00000451893 ODR4Q5SWX8 454 aa24.45■■□□□ 1.5
C9orf3-208ENST00000451893 SP7Q8TDD2 431 aaPredicted RBP24.45■■□□□ 1.5
C9orf3-208ENST00000451893 GABBR1Q9UBS5 961 aa24.45■■□□□ 1.5
C9orf3-208ENST00000451893 PCDHA4Q9UN74 947 aa24.45■■□□□ 1.5
C9orf3-208ENST00000451893 CEP131Q9UPN4 1083 aa24.45■■□□□ 1.5
C9orf3-208ENST00000451893 IGKV6D-21A0A0A0MT36 114 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 WDR64B1ANS9 1081 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 CHMP2AO43633 222 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 GAS7O60861 476 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 XBP1P17861 261 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 CTNNB1P35222 781 aa24.44■■□□□ 1.5
C9orf3-208ENST00000451893 NFX1Q12986 1120 aaKnown RBP24.44■■□□□ 1.5
C9orf3-208ENST00000451893 GPM6BQ13491 265 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms