RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 PPFIA1Q13136 1202 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 ADGRE1Q14246 886 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 PFKFB3Q16875 520 aaPredicted RBP9.9□□□□□ -0.82
RFX3-209ENST00000451859 SPRED2Q7Z698 418 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 RASGRP4Q8TDF6 673 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 LMBR1Q8WVP7 490 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 SEPT1Q8WYJ6 367 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 SDF4Q9BRK5 362 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 UPF3BQ9BZI7 483 aaKnown RBP9.9□□□□□ -0.82
RFX3-209ENST00000451859 JPH1Q9HDC5 661 aaPredicted RBP9.9□□□□□ -0.82
RFX3-209ENST00000451859 PRDM6Q9NQX0 595 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 KCNH7Q9NS40 1196 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 SLC9A2Q9UBY0 812 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 KIF28PB7ZC32 967 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 hCG_1984214I3L0E3 225 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 LGR5O75473 907 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 FOSP01100 380 aaPredicted RBP9.89□□□□□ -0.83
RFX3-209ENST00000451859 CXCL10P02778 98 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 GNAT1P11488 350 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 RCAN1P53805 252 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 STK3Q13188 491 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 IKBKEQ14164 716 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 GRIK4Q16099 956 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 RUFY3Q7L099 469 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 REXO1Q8N1G1 1221 aaKnown RBP9.89□□□□□ -0.83
RFX3-209ENST00000451859 ZNF713Q8N859 430 aaPredicted RBP9.89□□□□□ -0.83
RFX3-209ENST00000451859 DBF4BQ8NFT6 615 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 ARNTL2Q8WYA1 636 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 ZBTB10Q96DT7 871 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 OSBPL7Q9BZF2 842 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 PPP4R2Q9NY27 417 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 MTUS1Q9ULD2 1270 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 CYP46A1Q9Y6A2 500 aa9.89□□□□□ -0.83
RFX3-209ENST00000451859 NID2Q14112 1375 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 EMSYQ7Z589 1322 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 BRWD1Q9NSI6 2320 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 UPP2O95045 317 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 PARNO95453 639 aaKnown RBP9.88□□□□□ -0.83
RFX3-209ENST00000451859 PDIA3P30101 505 aaKnown RBP9.88□□□□□ -0.83
RFX3-209ENST00000451859 HOXC8P31273 242 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 SREBF1P36956 1147 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 CLK2P49760 499 aaKnown RBP9.88□□□□□ -0.83
RFX3-209ENST00000451859 ACTR2P61160 394 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 TAP1Q03518 808 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 ITGB3BPQ13352 177 aaPredicted RBP9.88□□□□□ -0.83
RFX3-209ENST00000451859 AP3B2Q13367 1082 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 TOB2Q14106 344 aaPredicted RBP9.88□□□□□ -0.83
RFX3-209ENST00000451859 PKN1Q16512 942 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 CEP55Q53EZ4 464 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.88□□□□□ -0.83
RFX3-209ENST00000451859 RUFY4Q6ZNE9 571 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 PLA2G4DQ86XP0 818 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 MYOCDQ8IZQ8 938 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 PHOSPHO2Q8TCD6 241 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 CCDC12Q8WUD4 166 aaPredicted RBP9.88□□□□□ -0.83
RFX3-209ENST00000451859 TRAPPC12Q8WVT3 735 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 FAM49AQ9H0Q0 323 aaPredicted RBP9.88□□□□□ -0.83
RFX3-209ENST00000451859 GLT8D2Q9H1C3 349 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 SMARCAD1Q9H4L7 1026 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 AZI2Q9H6S1 392 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 AGO4Q9HCK5 861 aaKnown RBP9.88□□□□□ -0.83
RFX3-209ENST00000451859 C6orf50Q9HD87 102 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 ERAP1Q9NZ08 941 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 VPS54Q9P1Q0 977 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 TSR3Q9UJK0 312 aaKnown RBP9.88□□□□□ -0.83
RFX3-209ENST00000451859 TUBE1Q9UJT0 475 aa9.88□□□□□ -0.83
RFX3-209ENST00000451859 MYO7AQ13402 2215 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 NRCAMQ92823 1304 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 TTC3P53804 2025 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 ABHD14A-ACY1A0A1B0GW23 586 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 EPOPA6NHQ4 379 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 CPLX1O14810 134 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 BACH1O14867 736 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 PRPF3O43395 683 aaKnown RBP9.87□□□□□ -0.83
RFX3-209ENST00000451859 DTNBO60941 627 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 TMEM62Q0P6H9 643 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 SKIV2LQ15477 1246 aaKnown RBP9.87□□□□□ -0.83
RFX3-209ENST00000451859 KRT40Q6A162 431 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 TRMT1LQ7Z2T5 733 aaKnown RBP9.87□□□□□ -0.83
RFX3-209ENST00000451859 DNAJB3Q8WWF6 145 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 SEPT8Q92599 483 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 PCYT2Q99447 389 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 COL25A1Q9BXS0 654 aaPredicted RBP9.87□□□□□ -0.83
RFX3-209ENST00000451859 RNF26Q9BY78 433 aaPredicted RBP9.87□□□□□ -0.83
RFX3-209ENST00000451859 AGXT2Q9BYV1 514 aa9.87□□□□□ -0.83
RFX3-209ENST00000451859 NFASCO94856 1347 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 ESYT2A0FGR8 921 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 FAM86B1E9PN63 330 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 MAFGO15525 162 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 EFCAB14O75071 495 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 GJB5O95377 273 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 CCNE2O96020 404 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 AMHP03971 560 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 FAM86B2P0C5J1 330 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 GHRP10912 638 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 INSRRP14616 1297 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 GNA11P29992 359 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 NLRP5P59047 1200 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 ADAM17P78536 824 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 NTRK3Q16288 839 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms