RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 TEKT3Q9BXF9 490 aa17.55■□□□□ 0.4
LIMS1-210ENST00000449684 PCDHA2Q9Y5H9 948 aa17.55■□□□□ 0.4
LIMS1-210ENST00000449684 CDY2AQ9Y6F7 541 aa17.55■□□□□ 0.4
LIMS1-210ENST00000449684 MSH4O15457 936 aa17.54■□□□□ 0.4
LIMS1-210ENST00000449684 CHMP2AO43633 222 aa17.54■□□□□ 0.4
LIMS1-210ENST00000449684 GTPBP6O43824 516 aaPredicted RBP17.54■□□□□ 0.4
LIMS1-210ENST00000449684 UPP2O95045 317 aa17.54■□□□□ 0.4
LIMS1-210ENST00000449684 CHRNA1P02708 482 aa17.54■□□□□ 0.4
LIMS1-210ENST00000449684 MRPS6P82932 125 aaKnown RBP17.54■□□□□ 0.4
LIMS1-210ENST00000449684 ZNF484Q5JVG2 852 aa17.54■□□□□ 0.4
LIMS1-210ENST00000449684 MTHFD1LQ6UB35 978 aa17.54■□□□□ 0.4
LIMS1-210ENST00000449684 ZBTB10Q96DT7 871 aa17.54■□□□□ 0.4
LIMS1-210ENST00000449684 BRMS1Q9HCU9 246 aa17.54■□□□□ 0.4
LIMS1-210ENST00000449684 GABBR1Q9UBS5 961 aa17.54■□□□□ 0.4
LIMS1-210ENST00000449684 INSL6Q9Y581 213 aa17.54■□□□□ 0.4
LIMS1-210ENST00000449684 SMIM35A0A1B0GVV1 85 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 MARCH6O60337 910 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 KLRC1P26715 233 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 TAP1Q03518 808 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 TMEM62Q0P6H9 643 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 ME3Q16798 604 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 INF2Q27J81 1249 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 LETM2Q2VYF4 491 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 MICALL1Q8N3F8 863 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 NME8Q8N427 588 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 BBXQ8WY36 941 aaPredicted RBP17.53■□□□□ 0.4
LIMS1-210ENST00000449684 LENG9Q96B70 501 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 RIT2Q99578 217 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 PHF20Q9BVI0 1012 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 DISC1Q9NRI5 854 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 TRPV2Q9Y5S1 764 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 COL1A2P08123 1366 aa17.53■□□□□ 0.4
LIMS1-210ENST00000449684 DTNBO60941 627 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 TDP2O95551 362 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 SFNP31947 248 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 JAK3P52333 1124 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 MGAT3Q09327 533 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 TRIM29Q14134 588 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 ADGRE1Q14246 886 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 CCDC85BQ15834 202 aaPredicted RBP17.52■□□□□ 0.4
LIMS1-210ENST00000449684 Q4G0T1 1027 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 TSHZ1Q6ZSZ6 1077 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 GTF3C6Q969F1 213 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 IL17RAQ96F46 866 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 FAM167AQ96KS9 214 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 YME1L1Q96TA2 773 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 OSBPL7Q9BZF2 842 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 NRBP2Q9NSY0 501 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 DDX25Q9UHL0 483 aaKnown RBP17.52■□□□□ 0.4
LIMS1-210ENST00000449684 CEP131Q9UPN4 1083 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 GINS2Q9Y248 185 aa17.52■□□□□ 0.4
LIMS1-210ENST00000449684 MAFBQ9Y5Q3 323 aaPredicted RBP17.52■□□□□ 0.4
LIMS1-210ENST00000449684 CYP3A7-CYP3A51PA0A087WV96 503 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 LCHNA4D1U4 455 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 M0R2N6 131 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 CTDNEP1O95476 244 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 CYP3A7P24462 503 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 LPIN1Q14693 890 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 FBXO47Q5MNV8 452 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 MOXD1Q6UVY6 613 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 MIER3Q7Z3K6 550 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 NEK8Q86SG6 692 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 METTL13Q8N6R0 699 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 USP38Q8NB14 1042 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 SLC5A5Q92911 643 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 NAP1L4Q99733 375 aaKnown RBP17.51■□□□□ 0.39
LIMS1-210ENST00000449684 CDH23Q9H251 3354 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 MTUS1Q9ULD2 1270 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 CHD9Q3L8U1 2897 aa17.51■□□□□ 0.39
LIMS1-210ENST00000449684 MYH9P35579 1960 aaKnown RBP17.5■□□□□ 0.39
LIMS1-210ENST00000449684 RBAK-RBAKDNI3L0D1 243 aa17.5■□□□□ 0.39
LIMS1-210ENST00000449684 RFXAPO00287 272 aa17.5■□□□□ 0.39
LIMS1-210ENST00000449684 KRT2P35908 639 aa17.5■□□□□ 0.39
LIMS1-210ENST00000449684 NPY5RQ15761 445 aa17.5■□□□□ 0.39
LIMS1-210ENST00000449684 PIK3AP1Q6ZUJ8 805 aa17.5■□□□□ 0.39
LIMS1-210ENST00000449684 GJA10Q969M2 543 aa17.5■□□□□ 0.39
LIMS1-210ENST00000449684 TOP1MTQ969P6 601 aa17.5■□□□□ 0.39
LIMS1-210ENST00000449684 TGS1Q96RS0 853 aaKnown RBP17.5■□□□□ 0.39
LIMS1-210ENST00000449684 CELF4Q9BZC1 486 aaKnown RBP17.5■□□□□ 0.39
LIMS1-210ENST00000449684 TSPYL2Q9H2G4 693 aaPredicted RBP17.5■□□□□ 0.39
LIMS1-210ENST00000449684 UNC45AQ9H3U1 944 aa17.5■□□□□ 0.39
LIMS1-210ENST00000449684 GJB4Q9NTQ9 266 aa17.5■□□□□ 0.39
LIMS1-210ENST00000449684 SQORQ9Y6N5 450 aa17.5■□□□□ 0.39
LIMS1-210ENST00000449684 MICAL3Q7RTP6 2002 aa17.5■□□□□ 0.39
LIMS1-210ENST00000449684 DLL1O00548 723 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 MAGEB2O15479 319 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 EDIL3O43854 480 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 CCNT1O60563 726 aaKnown RBP17.49■□□□□ 0.39
LIMS1-210ENST00000449684 ARHGEF15O94989 841 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 LARGE1O95461 756 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 ATP4AP20648 1035 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 TMOD1P28289 359 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 CD52P31358 61 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 FOSBP53539 338 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 PAK2Q13177 524 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 SKIV2LQ15477 1246 aaKnown RBP17.49■□□□□ 0.39
LIMS1-210ENST00000449684 RDM1Q8NG50 284 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 FTHL17Q9BXU8 183 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 LIMCH1Q9UPQ0 1083 aa17.49■□□□□ 0.39
LIMS1-210ENST00000449684 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms