RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 FKBP3Q00688 224 aaKnown RBP11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 UBXN1Q04323 297 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 BAATQ14032 418 aaPredicted RBP11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 CTTNQ14247 550 aaKnown RBP11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 TMEM132BQ14DG7 1078 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 ARSHQ5FYA8 562 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 ARMC9Q7Z3E5 817 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 PNMA8AQ86V59 439 aaPredicted RBP11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 TC2NQ8N9U0 490 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 RDM1Q8NG50 284 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 GPRASP2Q96D09 838 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 CDCA5Q96FF9 252 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 CNOT6LQ96LI5 555 aaKnown RBP11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 CEP63Q96MT8 703 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 BAG1Q99933 345 aaPredicted RBP11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 NUP58Q9BVL2 599 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 RGL1Q9NZL6 768 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 SEL1LQ9UBV2 794 aa11.71□□□□□ -0.54
VIPAS39-203ENST00000448935 A0A0G2JMZ2 1700 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 ZSCAN12O43309 604 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 MYCLP12524 364 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 JAK3P52333 1124 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 PSMC6P62333 389 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 KRT76Q01546 638 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 GPR162Q16538 588 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 FKBP15Q5T1M5 1219 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 STXBP4Q6ZWJ1 553 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 VSIG10LQ86VR7 867 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 CCAR2Q8N163 923 aaKnown RBP11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 RETREG2Q8NC44 543 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 IL31RAQ8NI17 732 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 HPS3Q969F9 1004 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 PRIMPOLQ96LW4 560 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 REEP2Q9BRK0 252 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 ZHX3Q9H4I2 956 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 ZSWIM4Q9H7M6 989 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 ODF2LQ9ULJ1 636 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 RIPK3Q9Y572 518 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 PCDHA2Q9Y5H9 948 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 PFASO15067 1338 aa11.7□□□□□ -0.54
VIPAS39-203ENST00000448935 A0A0G2JLL6 359 aaPredicted RBP11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 GOLGA6L9A6NEM1 432 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 UNCXA6NJT0 531 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 PES1O00541 588 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 DKC1O60832 514 aaKnown RBP eCLIP11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 MFAP3LO75121 409 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 NR3C2P08235 984 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 COPB2P35606 906 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 IRX3P78415 501 aaPredicted RBP11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 PLS1Q14651 629 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 EDRF1Q3B7T1 1238 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 GNPTABQ3T906 1256 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 RINT1Q6NUQ1 792 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 LBX2Q6XYB7 198 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 PRRT2Q7Z6L0 340 aaPredicted RBP11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 METTL3Q86U44 580 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 DNERQ8NFT8 737 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 WNK4Q96J92 1243 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 IWS1Q96ST2 819 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 LXNQ9BS40 222 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 NOC4LQ9BVI4 516 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 OLFML3Q9NRN5 406 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 CYP39A1Q9NYL5 469 aa11.69□□□□□ -0.54
VIPAS39-203ENST00000448935 NPHP3-ACAD11A0A0J9YXS1 232 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 ARHGEF35A5YM69 484 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 WDR64B1ANS9 1081 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 DHX15O43143 795 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 FAM13AO94988 1023 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 LYPLA2O95372 231 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 SLC34A2O95436 690 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 QARSP47897 775 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 RBL2Q08999 1139 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 PPIL2Q13356 520 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 PTPN14Q15678 1187 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 MAN2A1Q16706 1144 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 TSR1Q2NL82 804 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 ZCWPW2Q504Y3 356 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 GADL1Q6ZQY3 521 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 C1orf186Q6ZWK4 172 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 FASTKD5Q7L8L6 764 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 ZNF784Q8NCA9 323 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 SLAIN1Q8ND83 568 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 ZNF507Q8TCN5 953 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 TIPINQ9BVW5 301 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 ELP3Q9H9T3 547 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 DBR1Q9UK59 544 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 KCNH4Q9UQ05 1017 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 R3HCC1Q9Y3T6 440 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 SAMM50Q9Y512 469 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 UBE4BO95155 1302 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 B4DLN1 442 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 DDX39AO00148 427 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 TRAF5O00463 557 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 EIF3DO15371 548 aaKnown RBP eCLIP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 CALUO43852 315 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 OATP04181 439 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 GUCY2CP25092 1073 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 ADKP55263 362 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 RAD51AP2Q09MP3 1159 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms