RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 PCDHB7Q9Y5E2 793 aa20.65■□□□□ 0.9
CHCHD3-203ENST00000448878 UBIAD1Q9Y5Z9 338 aa20.65■□□□□ 0.9
CHCHD3-203ENST00000448878 TTC3P53804 2025 aa20.65■□□□□ 0.9
CHCHD3-203ENST00000448878 PLEKHA8P1O95397 391 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 GNAQP50148 359 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 ANTXR2P58335 489 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 COASYQ13057 564 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 TMEM266Q2M3C6 531 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 CCDC82Q8N4S0 544 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 SMRP1Q8NCR6 262 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 LZTS2Q9BRK4 669 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 CELF4Q9BZC1 486 aaKnown RBP20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 JPH1Q9HDC5 661 aaPredicted RBP20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 JADE2Q9NQC1 790 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 SLC9A2Q9UBY0 812 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 PCDHA6Q9UN73 950 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 PCDHB12Q9Y5F1 795 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 PCDHA8Q9Y5H6 950 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 SQORQ9Y6N5 450 aa20.64■□□□□ 0.89
CHCHD3-203ENST00000448878 PIEZO1Q92508 2521 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 hCG_1642624A0A1W2PR95 340 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 CCDC69A6NI79 296 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 LOC730098B7Z3J9 87 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 DDAH1O94760 285 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 RXRAP19793 462 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 KRT76Q01546 638 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 PKN1Q16512 942 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 SRBD1Q8N5C6 995 aaKnown RBP20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 MAP3K14Q99558 947 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 PRRX2Q99811 253 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 PHF7Q9BWX1 381 aaPredicted RBP20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 AAASQ9NRG9 546 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 PCDHA2Q9Y5H9 948 aa20.63■□□□□ 0.89
CHCHD3-203ENST00000448878 MAFGO15525 162 aa20.62■□□□□ 0.89
CHCHD3-203ENST00000448878 SMARCA1P28370 1054 aa20.62■□□□□ 0.89
CHCHD3-203ENST00000448878 TTC22Q5TAA0 569 aa20.62■□□□□ 0.89
CHCHD3-203ENST00000448878 RAB11FIP4Q86YS3 637 aa20.62■□□□□ 0.89
CHCHD3-203ENST00000448878 PCYT2Q99447 389 aa20.62■□□□□ 0.89
CHCHD3-203ENST00000448878 SDF4Q9BRK5 362 aa20.62■□□□□ 0.89
CHCHD3-203ENST00000448878 LY9Q9HBG7 655 aa20.62■□□□□ 0.89
CHCHD3-203ENST00000448878 KIAA1671Q9BY89 1806 aa20.62■□□□□ 0.89
CHCHD3-203ENST00000448878 IGSF9BQ9UPX0 1349 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 DENND3A2RUS2 1198 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 TBKBP1A7MCY6 615 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 GLP2RO95838 553 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 GSPT1P15170 499 aaKnown RBP20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 CHMLP26374 656 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 STAT5BP51692 787 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 PLCB4Q15147 1175 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 ZBTB33Q86T24 672 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 MB21D2Q8IYB1 491 aaPredicted RBP20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 THNSL1Q8IYQ7 743 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 CRIPAKQ8N1N5 446 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 FBXL6Q8N531 539 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 EXOC6Q8TAG9 804 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 TLR9Q9NR96 1032 aa20.61■□□□□ 0.89
CHCHD3-203ENST00000448878 PRC1O43663 620 aa20.6■□□□□ 0.89
CHCHD3-203ENST00000448878 SARSP49591 514 aaKnown RBP20.6■□□□□ 0.89
CHCHD3-203ENST00000448878 ACTR2P61160 394 aa20.6■□□□□ 0.89
CHCHD3-203ENST00000448878 RBM10P98175 930 aaKnown RBP20.6■□□□□ 0.89
CHCHD3-203ENST00000448878 HEATR3Q7Z4Q2 680 aa20.6■□□□□ 0.89
CHCHD3-203ENST00000448878 NME8Q8N427 588 aa20.6■□□□□ 0.89
CHCHD3-203ENST00000448878 APOL5Q9BWW9 433 aa20.6■□□□□ 0.89
CHCHD3-203ENST00000448878 TMX1Q9H3N1 280 aa20.6■□□□□ 0.89
CHCHD3-203ENST00000448878 KCNH7Q9NS40 1196 aa20.6■□□□□ 0.89
CHCHD3-203ENST00000448878 TMEM260Q9NX78 707 aa20.6■□□□□ 0.89
CHCHD3-203ENST00000448878 SMIM35A0A1B0GVV1 85 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 RPS6KA5O75582 802 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 KLRC1P26715 233 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 MTHFD1LQ6UB35 978 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 TMTC2Q8N394 836 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 NEK1Q96PY6 1258 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 PPP1R16BQ96T49 567 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 ADAM2Q99965 735 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 MXRA8Q9BRK3 442 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 FAM86C1Q9NVL1 165 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 RNF216Q9NWF9 866 aaPredicted RBP20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 TRIOO75962 3097 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 LOXHD1Q8IVV2 1947 aa20.59■□□□□ 0.89
CHCHD3-203ENST00000448878 PLXNA4Q9HCM2 1894 aa20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 DDX39AO00148 427 aaKnown RBP20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 BACH1O14867 736 aa20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 FGF18O76093 207 aa20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 SP100P23497 879 aaPredicted RBP20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 UBE3AQ05086 875 aa20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 SIGLEC14Q08ET2 396 aa20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 CBX2Q14781 532 aaPredicted RBP20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 FAM102BQ5T8I3 360 aa20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 PLPPR4Q7Z2D5 763 aa20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 CYP2W1Q8TAV3 490 aa20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 NOC2LQ9Y3T9 749 aaKnown RBP20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 RBM8AQ9Y5S9 174 aaKnown RBP20.58■□□□□ 0.89
CHCHD3-203ENST00000448878 TECTAO75443 2155 aa20.58■□□□□ 0.88
CHCHD3-203ENST00000448878 ST18O60284 1047 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 MGEA5O60502 916 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 SRGAP2BP0DMP2 458 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 CALM1P0DP23 149 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 CALM2P0DP24 149 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 CALM3P0DP25 149 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 ARP10275 920 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms