RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 POLD4Q9HCU8 107 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 PPP2R2CQ9Y2T4 447 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 CCDC151A5D8V7 595 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 IPO5O00410 1097 aaKnown RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 ZMYND10O75800 440 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 ELNP15502 786 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 SREBF1P36956 1147 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 CTCFP49711 727 aaPredicted RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 CLNS1AP54105 237 aaKnown RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 NEDD9Q14511 834 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 PGM5Q15124 567 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 SLC9C1Q4G0N8 1177 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 XRRA1Q6P2D8 792 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 SARM1Q6SZW1 724 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 POTEDQ86YR6 584 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 BCAS4Q8TDM0 211 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 SNX29Q8TEQ0 813 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 SCFD2Q8WU76 684 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 SCLT1Q96NL6 688 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 APBA2Q99767 749 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 MXRA8Q9BRK3 442 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 ARHGAP39Q9C0H5 1083 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 R3HDMLQ9H3Y0 253 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 ADAMTS5Q9UNA0 930 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 PHLPP2Q6ZVD8 1323 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 MYH4Q9Y623 1939 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 PIK3CDO00329 1044 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 DYNC1LI2O43237 492 aaPredicted RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 KIF1CO43896 1103 aaKnown RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 ZEB2O60315 1214 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 CNMDO75829 334 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 YEATS4O95619 227 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 GGPS1O95749 300 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 CASP8Q14790 479 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 ZNF569Q5MCW4 686 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 HAUS3Q68CZ6 603 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 TPH2Q8IWU9 490 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 OTUD6BQ8N6M0 293 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 REPS2Q8NFH8 660 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 NOC3LQ8WTT2 800 aaKnown RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 FERMT2Q96AC1 680 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 WDR11Q9BZH6 1224 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 CD248Q9HCU0 757 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 FAM169AQ9Y6X4 670 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 LAMA4Q16363 1823 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 RPSAP08865 295 aaKnown RBP6.54□□□□□ -1.36
PROM1-201ENST00000447510 HSPA1AP0DMV8 641 aaKnown RBP6.54□□□□□ -1.36
PROM1-201ENST00000447510 HSPA1BP0DMV9 641 aaKnown RBP6.54□□□□□ -1.36
PROM1-201ENST00000447510 HSD17B4P51659 736 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 LBX1P52954 281 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 CYP4A11Q02928 519 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 DOCK1Q14185 1865 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 BRD3Q15059 726 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 FAM47CQ5HY64 1035 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 PRAMEF19Q5SWL8 479 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 KCNV1Q6PIU1 500 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 EGFL6Q8IUX8 553 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 ABRAQ8N0Z2 381 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 CDK5RAP2Q96SN8 1893 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 ABHD16BQ9H3Z7 469 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 TBC1D22BQ9NU19 505 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 COBLO75128 1261 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 SKAP2O75563 359 aaPredicted RBP6.54□□□□□ -1.36
PROM1-201ENST00000447510 PAX7P23759 505 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 STAT6P42226 847 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 TNFAIP2Q03169 654 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 E2F5Q15329 346 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 LONRF3Q496Y0 759 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 EARS2Q5JPH6 523 aaKnown RBP6.54□□□□□ -1.36
PROM1-201ENST00000447510 RRAGBQ5VZM2 374 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 PCNX4Q63HM2 1172 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 CYFIP1Q7L576 1253 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 GIMAP8Q8ND71 665 aaPredicted RBP6.54□□□□□ -1.36
PROM1-201ENST00000447510 SPATA33Q96N06 139 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 CLIC6Q96NY7 704 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 CEP89Q96ST8 783 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 BAG1Q99933 345 aaPredicted RBP6.54□□□□□ -1.36
PROM1-201ENST00000447510 KCNH7Q9NS40 1196 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 PSD3Q9NYI0 1048 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 COL20A1Q9P218 1284 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 IMPACTQ9P2X3 320 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 FAM184BQ9ULE4 1060 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 MYO1FO00160 1098 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 LAD1O00515 517 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 KIF5CO60282 957 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 DKC1O60832 514 aaKnown RBP eCLIP6.54□□□□□ -1.36
PROM1-201ENST00000447510 CUTAO60888 179 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 C6orf222P0C671 652 aaPredicted RBP6.54□□□□□ -1.36
PROM1-201ENST00000447510 RARBP10826 455 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 ACVR2BQ13705 512 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 SLC39A14Q15043 492 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 TRMT44Q8IYL2 757 aaKnown RBP6.54□□□□□ -1.36
PROM1-201ENST00000447510 OR6J1Q8NGC5 347 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 IL31RAQ8NI17 732 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 CYP2W1Q8TAV3 490 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 MRPS27Q92552 414 aaKnown RBP6.54□□□□□ -1.36
PROM1-201ENST00000447510 KAT2BQ92831 832 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 GJA10Q969M2 543 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms