RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 CTU1Q7Z7A3 348 aaKnown RBP14.38□□□□□ -0.11
DDX56-206ENST00000446987 SGMS1Q86VZ5 419 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 TMTC1Q8IUR5 882 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 MB21D1Q8N884 522 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 SPDL1Q96EA4 605 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 CCDC114Q96M63 670 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 AGXT2Q9BYV1 514 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 SPATC1LQ9H0A9 340 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 MAD2L2Q9UI95 211 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 ZNFX1Q9P2E3 1918 aaKnown RBP14.38□□□□□ -0.11
DDX56-206ENST00000446987 BAZ2BQ9UIF8 2168 aaKnown RBP14.38□□□□□ -0.11
DDX56-206ENST00000446987 ITIH6Q6UXX5 1313 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 SOWAHDA6NJG2 315 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 DNAJC8O75937 253 aaPredicted RBP14.38□□□□□ -0.11
DDX56-206ENST00000446987 PFKFB1P16118 471 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 TNFRSF8P28908 595 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 SNAP25P60880 206 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 GRM4Q14833 912 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 PAPD7Q5XG87 772 aaKnown RBP14.38□□□□□ -0.11
DDX56-206ENST00000446987 FAM160B2Q86V87 743 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 CNGA4Q8IV77 575 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 ZNF654Q8IZM8 581 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 GABRQQ9UN88 632 aa14.38□□□□□ -0.11
DDX56-206ENST00000446987 RBBP6Q7Z6E9 1792 aaKnown RBP14.38□□□□□ -0.11
DDX56-206ENST00000446987 PTPDC1A2A3K4 754 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 EME2A4GXA9 379 aaPredicted RBP14.37□□□□□ -0.11
DDX56-206ENST00000446987 PALM3A6NDB9 673 aaPredicted RBP14.37□□□□□ -0.11
DDX56-206ENST00000446987 ATP2A1O14983 1001 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 RTN3O95197 1032 aaPredicted RBP14.37□□□□□ -0.11
DDX56-206ENST00000446987 LSP1P33241 339 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 PTGISQ16647 500 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 SKIDA1Q1XH10 827 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 SYDE2Q5VT97 1194 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 EMBQ6PCB8 327 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 CCDC121Q6ZUS5 278 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 PPFIBP1Q86W92 1011 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 MLKLQ8NB16 471 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 CAVIN3Q969G5 261 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 RANBP17Q9H2T7 1088 aaKnown RBP14.37□□□□□ -0.11
DDX56-206ENST00000446987 IRAK4Q9NWZ3 460 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 RIPK3Q9Y572 518 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 TRIM17Q9Y577 477 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 RPS6KL1Q9Y6S9 549 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 PLXNA1Q9UIW2 1896 aa14.37□□□□□ -0.11
DDX56-206ENST00000446987 SETSIPP0DME0 302 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 MTA1Q13330 715 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 CCDC38Q502W7 563 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 ASPRV1Q53RT3 343 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 GPATCH4Q5T3I0 446 aaKnown RBP14.36□□□□□ -0.11
DDX56-206ENST00000446987 CAPRIN2Q6IMN6 1127 aaKnown RBP14.36□□□□□ -0.11
DDX56-206ENST00000446987 PPP4R3AQ6IN85 833 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 MIS18BP1Q6P0N0 1132 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 RAB11FIP4Q86YS3 637 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 CCDC170Q8IYT3 715 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 RPUSD2Q8IZ73 545 aaKnown RBP14.36□□□□□ -0.11
DDX56-206ENST00000446987 FBXL16Q8N461 479 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 TRIML1Q8N9V2 468 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 ANKRD27Q96NW4 1050 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 UBA5Q9GZZ9 404 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 GJD2Q9UKL4 321 aa14.36□□□□□ -0.11
DDX56-206ENST00000446987 CYTH3O43739 400 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 PPP1R37O75864 691 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 SMNDC1O75940 238 aaKnown RBP eCLIP14.35□□□□□ -0.11
DDX56-206ENST00000446987 DDAH1O94760 285 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 RXRAP19793 462 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 MAGEA8P43361 318 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 FCGRTP55899 365 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 PRKCZQ05513 592 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
DDX56-206ENST00000446987 MTF1Q14872 753 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 APOA5Q6Q788 366 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 Q6ZUG5 572 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 ZNF572Q7Z3I7 529 aaPredicted RBP14.35□□□□□ -0.11
DDX56-206ENST00000446987 GPR142Q7Z601 462 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 RIOX2Q8IUF8 465 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 CD302Q8IX05 232 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 EHBP1Q8NDI1 1231 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 CHURC1Q8WUH1 139 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 ZFAND2BQ8WV99 257 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 USP6NLQ92738 828 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 SPAG5Q96R06 1193 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 MCOLN1Q9GZU1 580 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 RAVER2Q9HCJ3 691 aaKnown RBP14.35□□□□□ -0.11
DDX56-206ENST00000446987 SRRDQ9UH36 339 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 TRPC6Q9Y210 931 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.35□□□□□ -0.11
DDX56-206ENST00000446987 MFAP3LO75121 409 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 PPP6R2O75170 966 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 CTDNEP1O95476 244 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 PARP1P09874 1014 aaKnown RBP14.35□□□□□ -0.11
DDX56-206ENST00000446987 PBX1P40424 430 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 SYKP43405 635 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 EPHB4P54760 987 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 TBC1D25Q3MII6 688 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 RNF187Q5TA31 235 aaPredicted RBP14.35□□□□□ -0.11
DDX56-206ENST00000446987 SDCCAG8Q86SQ7 713 aaPredicted RBP14.35□□□□□ -0.11
DDX56-206ENST00000446987 NLRP14Q86W24 1093 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 MMGT1Q8N4V1 131 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 SHCBP1Q8NEM2 672 aa14.35□□□□□ -0.11
DDX56-206ENST00000446987 TRIM58Q8NG06 486 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms