RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 P4HBP07237 508 aaKnown RBP10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 ZSCAN20P17040 1043 aaPredicted RBP10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 GAP43P17677 238 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 EDRF1Q3B7T1 1238 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 FOXR2Q6PJQ5 311 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 B3GNT9Q6UX72 402 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 EPM2AIP1Q7L775 607 aaPredicted RBP10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 NIPA1Q7RTP0 329 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 C12orf42Q96LP6 360 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 CRACR2AQ9BSW2 395 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 IKZF4Q9H2S9 585 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 ZSWIM4Q9H7M6 989 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 TBC1D22BQ9NU19 505 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 HOXC10Q9NYD6 342 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 SIK3Q9Y2K2 1263 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 PEX10O60683 326 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 MAP3K9P80192 1104 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 GHRHRQ02643 423 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 ZNF569Q5MCW4 686 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 ODR4Q5SWX8 454 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 PADI6Q6TGC4 694 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 PPP4R3CPQ6ZMV5 832 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 RRAGAQ7L523 313 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 CACNA2D4Q7Z3S7 1137 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 FAM178BQ8IXR5 827 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 SAMD3Q8N6K7 520 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 REPS2Q8NFH8 660 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 NEK11Q8NG66 645 aa10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 CCDC43Q96MW1 224 aaKnown RBP10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 NHEJ1Q9H9Q4 299 aaPredicted RBP10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 ZNF214Q9UL59 606 aaPredicted RBP10.5□□□□□ -0.73
COL6A4P1-201ENST00000446690 A0A1W2PQJ5 194 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 PPP1R12BO60237 982 aaPredicted RBP10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 SORBS3O60504 671 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 NR3C2P08235 984 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 MUTP22033 750 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 CCND2P30279 289 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 QARSP47897 775 aaKnown RBP10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 KCNMA1Q12791 1236 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 ZNF710Q8N1W2 664 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 SYT17Q9BSW7 474 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 TEX13BQ9BXU2 312 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 TFR2Q9UP52 801 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 TRAF3IP3Q9Y228 551 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 CSADQ9Y600 493 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 SNCAIPQ9Y6H5 919 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 SSC5DA1L4H1 1573 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 TMEM150BA6NC51 233 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 PDXKO00764 312 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 HIP1RO75146 1068 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 NR3C1P04150 777 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 OAZ1P54368 228 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 APBA1Q02410 837 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 SP4Q02446 784 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 TTLL12Q14166 644 aaPredicted RBP10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 DCAF17Q5H9S7 520 aaPredicted RBP10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 FIGNQ5HY92 759 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 NOL9Q5SY16 702 aaKnown RBP10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 TREML2Q5T2D2 321 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 TCERG1LQ5VWI1 586 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 C9orf131Q5VYM1 1079 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 NEK9Q8TD19 979 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 NSUN6Q8TEA1 469 aaKnown RBP10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 NLRC4Q9NPP4 1024 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 OLFML3Q9NRN5 406 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 TYW1Q9NV66 732 aaKnown RBP10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 ARMCX3Q9UH62 379 aaPredicted RBP10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 GUCA1BQ9UMX6 200 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 ADAMTS5Q9UNA0 930 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 PCDHB13Q9Y5F0 798 aa10.49□□□□□ -0.73
COL6A4P1-201ENST00000446690 LRRC53A6NM62 1247 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 SPDYE16A6NNV3 312 aaPredicted RBP10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 TULP1O00294 542 aaPredicted RBP10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 PLEKP08567 350 aaPredicted RBP10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 YBX3P16989 372 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 RPL13P26373 211 aaKnown RBP10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 YWHABP31946 246 aaKnown RBP10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 CYLC1P35663 651 aaPredicted RBP10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 NCBP1Q09161 790 aaKnown RBP10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 KCNH2Q12809 1159 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 MEA1Q16626 185 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 GADL1Q6ZQY3 521 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 ZNF720Q7Z2F6 126 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 KIAA1328Q86T90 577 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 NLRX1Q86UT6 975 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 VSIG10LQ86VR7 867 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 TRIM59Q8IWR1 403 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 LRRN4CLQ8ND94 238 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 RBM46Q8TBY0 533 aaKnown RBP10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 ERO1AQ96HE7 468 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 CCDC42Q96M95 316 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 LSM14BQ9BX40 385 aaKnown RBP10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 ACAD9Q9H845 621 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 L2HGDHQ9H9P8 463 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 ELP3Q9H9T3 547 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 TRIM10Q9UDY6 481 aa10.48□□□□□ -0.73
COL6A4P1-201ENST00000446690 ASTN1O14525 1302 aa10.47□□□□□ -0.73
COL6A4P1-201ENST00000446690 FRMPD4Q14CM0 1322 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms