RNA–Protein interactions for RNA: ENST00000446026.1

SMIM12-204, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-204ENST00000446026 USP14P54578 494 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 SLC7A5Q01650 507 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 SNX1Q13596 522 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 LETM2Q2VYF4 491 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 ARMC3Q5W041 872 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 FBXO46Q6PJ61 603 aaPredicted RBP9.78□□□□□ -0.84
SMIM12-204ENST00000446026 CAGE1Q8TC20 777 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 GJA10Q969M2 543 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 ITFG2Q969R8 447 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 ZBTB10Q96DT7 871 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 ABHD8Q96I13 439 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 CLMNQ96JQ2 1002 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 SH3GL3Q99963 347 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 SLC40A1Q9NP59 571 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 FAM207AQ9NSI2 230 aaPredicted RBP9.78□□□□□ -0.84
SMIM12-204ENST00000446026 CPSF2Q9P2I0 782 aaKnown RBP9.78□□□□□ -0.84
SMIM12-204ENST00000446026 LRWD1Q9UFC0 647 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 PCDHA4Q9UN74 947 aa9.78□□□□□ -0.84
SMIM12-204ENST00000446026 ROBO3Q96MS0 1386 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 GOLGA6BA6NDN3 693 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 IGF2BP3O00425 579 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMIM12-204ENST00000446026 ZEB2O60315 1214 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 IDEP14735 1019 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 GBP2P32456 591 aaPredicted RBP9.77□□□□□ -0.85
SMIM12-204ENST00000446026 LONP1P36776 959 aaKnown RBP9.77□□□□□ -0.85
SMIM12-204ENST00000446026 CDR1P51861 262 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 SMTNP53814 917 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 SPAG1Q07617 926 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 PDE4DQ08499 809 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 NFIAQ12857 509 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 PRAMEF18Q5VWM3 479 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 CCDC13Q8IYE1 715 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 BRI3BPQ8WY22 251 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 RRP36Q96EU6 259 aaKnown RBP9.77□□□□□ -0.85
SMIM12-204ENST00000446026 CNOT6LQ96LI5 555 aaKnown RBP9.77□□□□□ -0.85
SMIM12-204ENST00000446026 TTYH3Q9C0H2 523 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 MCOLN1Q9GZU1 580 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 ELP3Q9H9T3 547 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 SLC39A2Q9NP94 309 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 PI4KBQ9UBF8 816 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 MAD2L2Q9UI95 211 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 CAPN11Q9UMQ6 739 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 PCNTO95613 3336 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 FLT1P17948 1338 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 ENO4A6NNW6 628 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 NCK2O43639 380 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 RASSF9O75901 435 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 TUBBP07437 444 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 EZRP15311 586 aaKnown RBP9.77□□□□□ -0.85
SMIM12-204ENST00000446026 TECP42680 631 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 TUBB4BP68371 445 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 SNCBQ16143 134 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 ZC3H12AQ5D1E8 599 aaKnown RBP9.77□□□□□ -0.85
SMIM12-204ENST00000446026 CCDC26Q8TAB7 109 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 MICAL1Q8TDZ2 1067 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 SH3RF3Q8TEJ3 882 aaPredicted RBP9.77□□□□□ -0.85
SMIM12-204ENST00000446026 SPDL1Q96EA4 605 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 CRNKL1Q9BZJ0 848 aaKnown RBP9.77□□□□□ -0.85
SMIM12-204ENST00000446026 KANSL2Q9H9L4 492 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 AS3MTQ9HBK9 375 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 DDX4Q9NQI0 724 aaKnown RBP9.77□□□□□ -0.85
SMIM12-204ENST00000446026 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMIM12-204ENST00000446026 AFG3L2Q9Y4W6 797 aa9.77□□□□□ -0.85
SMIM12-204ENST00000446026 M0R2N6 131 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 PSMA7O14818 248 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 ORC4O43929 436 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 CCNT1O60563 726 aaKnown RBP9.76□□□□□ -0.85
SMIM12-204ENST00000446026 MTIF2P46199 727 aaKnown RBP9.76□□□□□ -0.85
SMIM12-204ENST00000446026 ASIC1P78348 528 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 APBA1Q02410 837 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 MIIPQ5JXC2 388 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 DYMQ7RTS9 669 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 FAM228AQ86W67 206 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 GIMAP8Q8ND71 665 aaPredicted RBP9.76□□□□□ -0.85
SMIM12-204ENST00000446026 SELENOOQ9BVL4 669 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 VCPKMTQ9H867 229 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 RMND1Q9NWS8 449 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 RLFQ13129 1914 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 CCL15-CCL14A0A0B4J2E2 113 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 MOCS3O95396 460 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 TRAPPC10P48553 1259 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 NT5C2P49902 561 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 ATP1A2P50993 1020 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 CCL15Q16663 113 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 KIAA0895Q8NCT3 520 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 NOC4LQ9BVI4 516 aaKnown RBP9.76□□□□□ -0.85
SMIM12-204ENST00000446026 HAUS4Q9H6D7 363 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 EXOC1Q9NV70 894 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 KBTBD4Q9NVX7 518 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 TMEM260Q9NX78 707 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 DMGDHQ9UI17 866 aaKnown RBP9.76□□□□□ -0.85
SMIM12-204ENST00000446026 SALL4Q9UJQ4 1053 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 FRMPD3Q5JV73 1810 aa9.76□□□□□ -0.85
SMIM12-204ENST00000446026 FAM170AA1A519 330 aa9.75□□□□□ -0.85
SMIM12-204ENST00000446026 TRPA1O75762 1119 aa9.75□□□□□ -0.85
SMIM12-204ENST00000446026 PTPRAP18433 802 aa9.75□□□□□ -0.85
SMIM12-204ENST00000446026 PABPC4Q13310 644 aaKnown RBP eCLIP9.75□□□□□ -0.853e-6■□□□□ 9.9
SMIM12-204ENST00000446026 TRIM14Q14142 442 aa9.75□□□□□ -0.85
SMIM12-204ENST00000446026 CCDC96Q2M329 555 aa9.75□□□□□ -0.85
SMIM12-204ENST00000446026 ARL6IP4Q66PJ3 421 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms