RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 ZKSCAN3Q9BRR0 538 aa9.25□□□□□ -0.93
LINC02549-201ENST00000445346 C17orf80Q9BSJ5 609 aa9.25□□□□□ -0.93
LINC02549-201ENST00000445346 MAF1Q9H063 256 aa9.25□□□□□ -0.93
LINC02549-201ENST00000445346 CPVLQ9H3G5 476 aa9.25□□□□□ -0.93
LINC02549-201ENST00000445346 RNF41Q9H4P4 317 aaPredicted RBP9.25□□□□□ -0.93
LINC02549-201ENST00000445346 KAT14Q9H8E8 782 aa9.25□□□□□ -0.93
LINC02549-201ENST00000445346 VAT1LQ9HCJ6 419 aa9.25□□□□□ -0.93
LINC02549-201ENST00000445346 DDX41Q9UJV9 622 aaKnown RBP9.25□□□□□ -0.93
LINC02549-201ENST00000445346 MRPL11Q9Y3B7 192 aaKnown RBP9.25□□□□□ -0.93
LINC02549-201ENST00000445346 LCTP09848 1927 aa9.25□□□□□ -0.93
LINC02549-201ENST00000445346 TET1Q8NFU7 2136 aa9.25□□□□□ -0.93
LINC02549-201ENST00000445346 FIGNL2A6NMB9 653 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 RSPH10B2B2RC85 870 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 SORBS3O60504 671 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 CFBP00751 764 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 RSPH10BP0C881 870 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 SNHG28P0DPA3 235 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 ZNF200P98182 395 aaPredicted RBP9.24□□□□□ -0.93
LINC02549-201ENST00000445346 TCTN1Q2MV58 587 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 CCDC178Q5BJE1 867 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 IQCA1Q86XH1 822 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 FBXO11Q86XK2 927 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 DGKHQ86XP1 1220 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 ADGRF4Q8IZF3 695 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 MRPL38Q96DV4 380 aaKnown RBP9.24□□□□□ -0.93
LINC02549-201ENST00000445346 FAM227BQ96M60 508 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 YME1L1Q96TA2 773 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 FAM50BQ9Y247 325 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 TRIP12Q14669 1992 aaPredicted RBP9.24□□□□□ -0.93
LINC02549-201ENST00000445346 EMSYQ7Z589 1322 aa9.24□□□□□ -0.93
LINC02549-201ENST00000445346 A0A0D9SFI3 127 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 H3BQ06 376 aaPredicted RBP9.23□□□□□ -0.93
LINC02549-201ENST00000445346 ZNF213O14771 459 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 PPFIA4O75335 1185 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 UPP2O95045 317 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 F2P00734 622 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 MYCLP12524 364 aaPredicted RBP9.23□□□□□ -0.93
LINC02549-201ENST00000445346 PTGIRP43119 386 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 MFAP1P55081 439 aaKnown RBP9.23□□□□□ -0.93
LINC02549-201ENST00000445346 EPC2Q52LR7 807 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 TIGD5Q53EQ6 642 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 KCNV1Q6PIU1 500 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 DBF4BQ8NFT6 615 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 RNF217Q8TC41 542 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 SEPT8Q92599 483 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 RILPL2Q969X0 211 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 SPATA33Q96N06 139 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 SAMD11Q96NU1 681 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 MLXIPQ9HAP2 919 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 PXMP2Q9NR77 195 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 RAB6BQ9NRW1 208 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 COL20A1Q9P218 1284 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 TANC1Q9C0D5 1861 aa9.23□□□□□ -0.93
LINC02549-201ENST00000445346 REV3LO60673 3130 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 C17orf102A2RUQ5 167 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 HAS3O00219 553 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 DCXO43602 365 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 PARP1P09874 1014 aaKnown RBP9.22□□□□□ -0.93
LINC02549-201ENST00000445346 NMIQ13287 307 aaPredicted RBP9.22□□□□□ -0.93
LINC02549-201ENST00000445346 GPM6BQ13491 265 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 MBTPS1Q14703 1052 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 TRIM71Q2Q1W2 868 aaKnown RBP9.22□□□□□ -0.93
LINC02549-201ENST00000445346 QRICH1Q2TAL8 776 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 ASPRV1Q53RT3 343 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 TCEAL5Q5H9L2 206 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 CELF3Q5SZQ8 465 aaKnown RBP9.22□□□□□ -0.93
LINC02549-201ENST00000445346 ZNF589Q86UQ0 364 aaPredicted RBP9.22□□□□□ -0.93
LINC02549-201ENST00000445346 TBC1D10CQ8IV04 446 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 ATP6V0A1Q93050 837 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 WNT8BQ93098 351 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 CCDC171Q6TFL3 1326 aa9.22□□□□□ -0.93
LINC02549-201ENST00000445346 BRWD1Q9NSI6 2320 aa9.21□□□□□ -0.93
LINC02549-201ENST00000445346 MUC6Q6W4X9 2439 aa9.21□□□□□ -0.93
LINC02549-201ENST00000445346 COL4A4P53420 1690 aaPredicted RBP9.21□□□□□ -0.93
LINC02549-201ENST00000445346 TTLL8A6PVC2 850 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 H3BNC9 293 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 GGPS1O95749 300 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 MRE11P49959 708 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 PDE1AP54750 535 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 HTRA4P83105 476 aaPredicted RBP9.21□□□□□ -0.94
LINC02549-201ENST00000445346 HSDL1Q3SXM5 330 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 PLEKHG4Q58EX7 1191 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 SERINC5Q86VE9 423 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 TMEM192Q8IY95 271 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 NEK9Q8TD19 979 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 TOP1MTQ969P6 601 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 PABPC5Q96DU9 382 aaKnown RBP9.21□□□□□ -0.94
LINC02549-201ENST00000445346 ZSCAN10Q96SZ4 725 aaPredicted RBP9.21□□□□□ -0.94
LINC02549-201ENST00000445346 PDCD2LQ9BRP1 358 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 AMNQ9BXJ7 453 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 UPF3BQ9BZI7 483 aaKnown RBP9.21□□□□□ -0.94
LINC02549-201ENST00000445346 NSUN3Q9H649 340 aaKnown RBP9.21□□□□□ -0.94
LINC02549-201ENST00000445346 CLDND1Q9NY35 253 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 ZMYM6O95789 1325 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 NEDD4P46934 1319 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 TRANK1O15050 2925 aa9.21□□□□□ -0.94
LINC02549-201ENST00000445346 B4E1Z4 1266 aa9.2□□□□□ -0.94
LINC02549-201ENST00000445346 H3BRB1 525 aa9.2□□□□□ -0.94
LINC02549-201ENST00000445346 RBAK-RBAKDNI3L0D1 243 aa9.2□□□□□ -0.94
LINC02549-201ENST00000445346 NOP56O00567 594 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms