RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 DDX11L8A8MPP1 907 aa15.8■□□□□ 0.12
SSBP3-208ENST00000444533 EML1O00423 815 aa15.8■□□□□ 0.12
SSBP3-208ENST00000444533 INSRRP14616 1297 aa15.8■□□□□ 0.12
SSBP3-208ENST00000444533 TMEM199Q8N511 208 aa15.8■□□□□ 0.12
SSBP3-208ENST00000444533 PPP1R13LQ8WUF5 828 aa15.8■□□□□ 0.12
SSBP3-208ENST00000444533 LMBR1Q8WVP7 490 aa15.8■□□□□ 0.12
SSBP3-208ENST00000444533 LXNQ9BS40 222 aa15.8■□□□□ 0.12
SSBP3-208ENST00000444533 SEPT9Q9UHD8 586 aaPredicted RBP15.8■□□□□ 0.12
SSBP3-208ENST00000444533 CFAP45Q9UL16 551 aa15.8■□□□□ 0.12
SSBP3-208ENST00000444533 VWA3AA6NCI4 1184 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 POTEMA6NI47 508 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 M0QZ92 97 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 KIAA0355O15063 1070 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 MAGEB2O15479 319 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 TIMP1P01033 207 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 SYN1P17600 705 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 TMOD1P28289 359 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 CYP4A11Q02928 519 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 CEBPZQ03701 1054 aaKnown RBP15.79■□□□□ 0.12
SSBP3-208ENST00000444533 SPIRE1Q08AE8 756 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 STK38Q15208 465 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 C4orf19Q8IY42 314 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 C4orf32Q8N8J7 132 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 RASSF8Q8NHQ8 419 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 DYDC2Q96IM9 177 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 CDK5RAP3Q96JB5 506 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 AK8Q96MA6 479 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 JPH2Q9BR39 696 aaPredicted RBP15.79■□□□□ 0.12
SSBP3-208ENST00000444533 PPP1R12CQ9BZL4 782 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 TUFT1Q9NNX1 390 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 PPME1Q9Y570 386 aa15.79■□□□□ 0.12
SSBP3-208ENST00000444533 MKI67P46013 3256 aaKnown RBP15.78■□□□□ 0.12
SSBP3-208ENST00000444533 PITPNM1O00562 1244 aa15.78■□□□□ 0.12
SSBP3-208ENST00000444533 TREHO43280 583 aa15.78■□□□□ 0.12
SSBP3-208ENST00000444533 CAND2O75155 1236 aa15.78■□□□□ 0.12
SSBP3-208ENST00000444533 PARNO95453 639 aaKnown RBP15.78■□□□□ 0.12
SSBP3-208ENST00000444533 CYP2C9P11712 490 aa15.78■□□□□ 0.12
SSBP3-208ENST00000444533 MUTP22033 750 aa15.78■□□□□ 0.12
SSBP3-208ENST00000444533 TXLNAP40222 546 aa15.78■□□□□ 0.12
SSBP3-208ENST00000444533 CCT6AP40227 531 aaKnown RBP15.78■□□□□ 0.12
SSBP3-208ENST00000444533 DNM2P50570 870 aa15.78■□□□□ 0.12
SSBP3-208ENST00000444533 TBC1D8BQ0IIM8 1120 aa15.78■□□□□ 0.12
SSBP3-208ENST00000444533 CTTNQ14247 550 aaKnown RBP15.78■□□□□ 0.12
SSBP3-208ENST00000444533 SERINC5Q86VE9 423 aa15.78■□□□□ 0.12
SSBP3-208ENST00000444533 RGL1Q9NZL6 768 aa15.78■□□□□ 0.12
SSBP3-208ENST00000444533 TBX21Q9UL17 535 aa15.78■□□□□ 0.12
SSBP3-208ENST00000444533 MYH9P35579 1960 aaKnown RBP15.78■□□□□ 0.12
SSBP3-208ENST00000444533 KAT6AQ92794 2004 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 KDM3AQ9Y4C1 1321 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 H0YGN5 161 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 NCLP19338 710 aaKnown RBP15.77■□□□□ 0.12
SSBP3-208ENST00000444533 KLRC1P26715 233 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 RPA1P27694 616 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 YWHABP31946 246 aaKnown RBP15.77■□□□□ 0.12
SSBP3-208ENST00000444533 LONP1P36776 959 aaKnown RBP15.77■□□□□ 0.12
SSBP3-208ENST00000444533 THPOP40225 353 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 ZNF200P98182 395 aaPredicted RBP15.77■□□□□ 0.12
SSBP3-208ENST00000444533 UGCGQ16739 394 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 FOXD4L6Q3SYB3 417 aaPredicted RBP15.77■□□□□ 0.12
SSBP3-208ENST00000444533 FAM173BQ6P4H8 233 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 FOXD4L3Q6VB84 417 aaPredicted RBP15.77■□□□□ 0.12
SSBP3-208ENST00000444533 METTL13Q8N6R0 699 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 IGSF22Q8N9C0 903 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 SNX29Q8TEQ0 813 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 SLC7A3Q8WY07 619 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 CEP170P1Q96L14 293 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 NACC1Q96RE7 527 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 POLR3CQ9BUI4 534 aaPredicted RBP15.77■□□□□ 0.12
SSBP3-208ENST00000444533 CLIC4Q9Y696 253 aa15.77■□□□□ 0.12
SSBP3-208ENST00000444533 TRIM43BA6NCK2 446 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 ZNF862O60290 1169 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 SLITRK3O94933 977 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 BRD1O95696 1058 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 HOXC8P31273 242 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 UBA7P41226 1012 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 FPGSQ05932 587 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 PPIGQ13427 754 aaKnown RBP eCLIP15.76■□□□□ 0.11
SSBP3-208ENST00000444533 MTERF2Q49AM1 385 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 IER5Q5VY09 327 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 MFSD5Q6N075 450 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 MTHFD1LQ6UB35 978 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 SH3RF1Q7Z6J0 888 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 RPUSD2Q8IZ73 545 aaKnown RBP15.76■□□□□ 0.11
SSBP3-208ENST00000444533 ZNF710Q8N1W2 664 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 NME8Q8N427 588 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 TRIM43Q96BQ3 446 aaPredicted RBP15.76■□□□□ 0.11
SSBP3-208ENST00000444533 CALML4Q96GE6 196 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 MAP7D2Q96T17 732 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 HSD17B14Q9BPX1 270 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 NOC4LQ9BVI4 516 aaKnown RBP15.76■□□□□ 0.11
SSBP3-208ENST00000444533 NIFKQ9BYG3 293 aaKnown RBP15.76■□□□□ 0.11
SSBP3-208ENST00000444533 NT5C3AQ9H0P0 336 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 PCDHA2Q9Y5H9 948 aa15.76■□□□□ 0.11
SSBP3-208ENST00000444533 SMIM35A0A1B0GVV1 85 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 MBLAC1A4D2B0 266 aaPredicted RBP15.75■□□□□ 0.11
SSBP3-208ENST00000444533 SLC26A4O43511 780 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 LYPLA2O95372 231 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 YEATS4O95619 227 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 XRCC6P12956 609 aaKnown RBP eCLIP15.75■□□□□ 0.11
SSBP3-208ENST00000444533 SELPP16109 830 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms