RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 NR5A1Q13285 461 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 ORC2Q13416 577 aaPredicted RBP14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 ZNF484Q5JVG2 852 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 MARCH8Q5T0T0 291 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 SWSAP1Q6NVH7 229 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 CNKSR3Q6P9H4 555 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 TRAF7Q6Q0C0 670 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 B3GNT9Q6UX72 402 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 OTOP2Q7RTS6 562 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 DEFB128Q7Z7B8 93 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 SLFN12Q8IYM2 578 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 FBXO18Q8NFZ0 1043 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 PHOSPHO2Q8TCD6 241 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 WNT8BQ93098 351 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 FTOQ9C0B1 505 aaKnown RBP eCLIP14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 FOXP1Q9H334 677 aaPredicted RBP14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 DISC1Q9NRI5 854 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 CEP131Q9UPN4 1083 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 PCDHA2Q9Y5H9 948 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 SLC4A7Q9Y6M7 1214 aa14.16□□□□□ -0.14
CDCA4P3-201ENST00000442572 SMIM35A0A1B0GVV1 85 aa14.15□□□□□ -0.14
CDCA4P3-201ENST00000442572 ABHD14A-ACY1A0A1B0GW23 586 aa14.15□□□□□ -0.14
CDCA4P3-201ENST00000442572 BAG4O95429 457 aaKnown RBP14.15□□□□□ -0.14
CDCA4P3-201ENST00000442572 PPP2R5CQ13362 524 aa14.15□□□□□ -0.14
CDCA4P3-201ENST00000442572 RAB30Q15771 203 aa14.15□□□□□ -0.14
CDCA4P3-201ENST00000442572 ZNF710Q8N1W2 664 aa14.15□□□□□ -0.14
CDCA4P3-201ENST00000442572 NME8Q8N427 588 aa14.15□□□□□ -0.14
CDCA4P3-201ENST00000442572 TMX3Q96JJ7 454 aa14.15□□□□□ -0.14
CDCA4P3-201ENST00000442572 SLC9A7Q96T83 725 aa14.15□□□□□ -0.14
CDCA4P3-201ENST00000442572 UNC45AQ9H3U1 944 aa14.15□□□□□ -0.14
CDCA4P3-201ENST00000442572 SQORQ9Y6N5 450 aa14.15□□□□□ -0.14
CDCA4P3-201ENST00000442572 ARID2Q68CP9 1835 aa14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 SLC37A4O43826 429 aa14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 DKC1O60832 514 aaKnown RBP eCLIP14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 NBNO60934 754 aa14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 GPNMBQ14956 572 aa14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 MIER3Q7Z3K6 550 aa14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 CKAP2LQ8IYA6 745 aa14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 USP38Q8NB14 1042 aa14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 APBB2Q92870 758 aa14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 NRBP2Q9NSY0 501 aa14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 CXXC1Q9P0U4 656 aaPredicted RBP14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 GABBR1Q9UBS5 961 aa14.14□□□□□ -0.15
CDCA4P3-201ENST00000442572 LAMA3Q16787 3333 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 ZBBXA8MT70 800 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 MAGEB2O15479 319 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 DTNBO60941 627 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 KCNJ6P48051 423 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 TRAPPC10P48553 1259 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 IKBKEQ14164 716 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 PLEKHG4Q58EX7 1191 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 EARS2Q5JPH6 523 aaKnown RBP14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 ZNF697Q5TEC3 545 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 IER5Q5VY09 327 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 MTHFD1LQ6UB35 978 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 KDM3AQ9Y4C1 1321 aa14.13□□□□□ -0.15
CDCA4P3-201ENST00000442572 M0QZ92 97 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 MARCH6O60337 910 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 OATP04181 439 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 ATP2A2P16615 1042 aaKnown RBP14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 ATP4AP20648 1035 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 DNAJB2P25686 324 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 KLRC1P26715 233 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 IGBP1P78318 339 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 MRPS6P82932 125 aaKnown RBP14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 MGAT3Q09327 533 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 MBTPS1Q14703 1052 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 XKR3Q5GH77 459 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 DEFB123Q8N688 67 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 DNAJB3Q8WWF6 145 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 SEPT8Q92599 483 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 HAS1Q92839 578 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 UIMC1Q96RL1 719 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 MSRAQ9UJ68 235 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 VAV3Q9UKW4 847 aa14.12□□□□□ -0.15
CDCA4P3-201ENST00000442572 FAM205CA6NFA0 338 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 ZBTB42B2RXF5 422 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 CHMP2AO43633 222 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 ZNF862O60290 1169 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 NEMFO60524 1076 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 CD2BP2O95400 341 aaKnown RBP14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 CHRNA1P02708 482 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 U2AF2P26368 475 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 PSMC5P62195 406 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 PRKCEQ02156 737 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 GNL2Q13823 731 aaKnown RBP14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 CALCRLQ16602 461 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 RUFY4Q6ZNE9 571 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 NOSTRINQ8IVI9 506 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 NIFKQ9BYG3 293 aaKnown RBP14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 NOL7Q9UMY1 257 aaKnown RBP14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 PCDHA12Q9UN75 941 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 PPME1Q9Y570 386 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 PCDHA11Q9Y5I1 949 aa14.11□□□□□ -0.15
CDCA4P3-201ENST00000442572 MYO9BQ13459 2157 aa14.1□□□□□ -0.15
CDCA4P3-201ENST00000442572 KIF28PB7ZC32 967 aa14.1□□□□□ -0.15
CDCA4P3-201ENST00000442572 C22orf31O95567 290 aa14.1□□□□□ -0.15
CDCA4P3-201ENST00000442572 P4HBP07237 508 aaKnown RBP14.1□□□□□ -0.15
CDCA4P3-201ENST00000442572 CTSHP09668 335 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms