RNA–Protein interactions for RNA: ENST00000442228.1

HCG25-219, Transcript of HLA complex group 25, humanhuman

TSL 5

Gene HCG25, Length 469 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG25-219ENST00000442228 NEMFO60524 1076 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 ZBED4O75132 1171 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 PPFIA3O75145 1194 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 CIAO1O76071 339 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 BAG3O95817 575 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 MYCLP1P12525 358 aaPredicted RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 IL15P40933 162 aaPredicted RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 RFX5P48382 616 aaPredicted RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 PAPOLAP51003 745 aaKnown RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 EPHB4P54760 987 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 USP17L24Q0WX57 530 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 FUT2Q10981 343 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 CUL4BQ13620 913 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 TRIM29Q14134 588 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 RCN1Q15293 331 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 GNPTABQ3T906 1256 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 C4orf46Q504U0 113 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 CAPRIN2Q6IMN6 1127 aaKnown RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 IQCEQ6IPM2 695 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 TBC1D9Q6ZT07 1266 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 C11orf96Q7Z7L8 435 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 FOXP4Q8IVH2 680 aaPredicted RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 TRPV1Q8NER1 839 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 SH3RF3Q8TEJ3 882 aaPredicted RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 WHAMMQ8TF30 809 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 LMBR1Q8WVP7 490 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 KAT2BQ92831 832 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 SLC35B4Q969S0 331 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 NEUROD6Q96NK8 337 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 IWS1Q96ST2 819 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 MTRQ99707 1265 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 TCHPQ9BT92 498 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 INO80BQ9C086 356 aaPredicted RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 USP44Q9H0E7 712 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 VCX3BQ9H321 246 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 GINM1Q9NU53 330 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 COMMD8Q9NX08 183 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 SLC5A4Q9NY91 659 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 UBAP1Q9NZ09 502 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 LRP2BPQ9P2M1 347 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 DDX25Q9UHL0 483 aaKnown RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 CROTQ9UKG9 612 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 ZNF215Q9UL58 517 aaPredicted RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 PAIP2BQ9ULR5 123 aaKnown RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 CORO1CQ9ULV4 474 aaPredicted RBP6.67□□□□□ -1.34
HCG25-219ENST00000442228 ZNF510Q9Y2H8 683 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 FAN1Q9Y2M0 1017 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 COG6Q9Y2V7 657 aa6.67□□□□□ -1.34
HCG25-219ENST00000442228 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.67□□□□□ -1.34
HCG25-219ENST00000442228 CHD9Q3L8U1 2897 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 LRRC10BA6NIK2 292 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 DCDC2CA8MYV0 355 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 FAM25EA8MYX2 175 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 RNF8O76064 485 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 FSBPO95073 299 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 PENKP01210 267 aaPredicted RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 HLA-DOAP06340 250 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 UBTFL1P0CB47 393 aaPredicted RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 TROVE2P10155 538 aaKnown RBP eCLIP6.66□□□□□ -1.34
HCG25-219ENST00000442228 CYBAP13498 195 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 CA8P35219 290 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 CLK2P49760 499 aaKnown RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 CCT8P50990 548 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 ARPC4P59998 168 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 JAG1P78504 1218 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 NUCB1Q02818 461 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 GRB14Q14449 540 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 MVPQ14764 893 aaKnown RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 SNX17Q15036 470 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 LRRC41Q15345 812 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 ENOX2Q16206 610 aaKnown RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 SHROOM1Q2M3G4 852 aaPredicted RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 PRAMEF19Q5SWL8 479 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 NAA16Q6N069 864 aaPredicted RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 CCDC174Q6PII3 467 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 CWC27Q6UX04 472 aaKnown RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 ATF7IPQ6VMQ6 1270 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 RNF180Q86T96 592 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 SKAP1Q86WV1 359 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 MAPKAPK5Q8IW41 473 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.66□□□□□ -1.34
HCG25-219ENST00000442228 TRIM58Q8NG06 486 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 UHMK1Q8TAS1 419 aaKnown RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 TGFBRAP1Q8WUH2 860 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 PPP2R3CQ969Q6 453 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 NSUN4Q96CB9 384 aaKnown RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 SCYL1Q96KG9 808 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 NECAB3Q96P71 396 aaPredicted RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 GSDMAQ96QA5 445 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 CORO1BQ9BR76 489 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 XPNPEP3Q9NQH7 507 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 TRMT1Q9NXH9 659 aaKnown RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 AATFQ9NY61 560 aaKnown RBP eCLIP6.66□□□□□ -1.34
HCG25-219ENST00000442228 TMEM63CQ9P1W3 806 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 SAP30BPQ9UHR5 308 aaKnown RBP6.66□□□□□ -1.34
HCG25-219ENST00000442228 MSRAQ9UJ68 235 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 PALD1Q9ULE6 856 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 ZBTB21Q9ULJ3 1066 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 PYCARDQ9ULZ3 195 aa6.66□□□□□ -1.34
HCG25-219ENST00000442228 TTLL3Q9Y4R7 772 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms