RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CTAGE6Q86UF2 777 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 CTAGE4Q8IX94 777 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 SCYL3Q8IZE3 742 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 TUBB2BQ9BVA1 445 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 GBP3Q9H0R5 595 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 NDST4Q9H3R1 872 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 MMRN2Q9H8L6 949 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 AS3MTQ9HBK9 375 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 SLC38A10Q9HBR0 1119 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 COL20A1Q9P218 1284 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 ATAD5Q96QE3 1844 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 SFI1A8K8P3 1242 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 PSMD10O75832 226 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 EIF2AK2P19525 551 aaKnown RBP15.58■□□□□ 0.08
LIMD1-202ENST00000440097 ERVK-24P63145 666 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 GIT2Q14161 759 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 VWA3BQ502W6 1294 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 MIIPQ5JXC2 388 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 TRMT1LQ7Z2T5 733 aaKnown RBP15.58■□□□□ 0.08
LIMD1-202ENST00000440097 SFR1Q86XK3 245 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 NOA1Q8NC60 698 aaKnown RBP15.58■□□□□ 0.08
LIMD1-202ENST00000440097 ZNF280CQ8ND82 737 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 ACRBPQ8NEB7 543 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 TEKT3Q9BXF9 490 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 YY1AP1Q9H869 796 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 FAM207AQ9NSI2 230 aaPredicted RBP15.58■□□□□ 0.08
LIMD1-202ENST00000440097 AGPAT5Q9NUQ2 364 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 ZNHIT6Q9NWK9 470 aaKnown RBP15.58■□□□□ 0.08
LIMD1-202ENST00000440097 PPP1R9AQ9ULJ8 1098 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 PITPNM2Q9BZ72 1349 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 RSPH10B2B2RC85 870 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 ZBTB39O15060 712 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 RSPH10BP0C881 870 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 MYCLP12524 364 aaPredicted RBP15.57■□□□□ 0.08
LIMD1-202ENST00000440097 EPS15P42566 896 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 BACE1P56817 501 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 TUBB4BP68371 445 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 TEX2Q8IWB9 1127 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 SLC5A5Q92911 643 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 CHP1Q99653 195 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 POLR3CQ9BUI4 534 aaPredicted RBP15.57■□□□□ 0.08
LIMD1-202ENST00000440097 RUSC1Q9BVN2 902 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 WDR11Q9BZH6 1224 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 GPRC5DQ9NZD1 345 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 MAN2A1Q16706 1144 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 IL31RAQ8NI17 732 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 SCFD1Q8WVM8 642 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 PPM1EQ8WY54 764 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 ATG4CQ96DT6 458 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 NAPGQ99747 312 aaPredicted RBP15.57■□□□□ 0.08
LIMD1-202ENST00000440097 MXRA8Q9BRK3 442 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 GINM1Q9NU53 330 aa15.57■□□□□ 0.08
LIMD1-202ENST00000440097 SLITRK3O94933 977 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 GCNT3O95395 438 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 EYA4O95677 639 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 HSD17B4P51659 736 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 CASP5P51878 434 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 RPS6P62753 249 aaKnown RBP15.56■□□□□ 0.08
LIMD1-202ENST00000440097 PPP2R5CQ13362 524 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 KRT26Q7Z3Y9 468 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 CLEC4DQ8WXI8 215 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 NUP58Q9BVL2 599 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 UNC45AQ9H3U1 944 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 MED4Q9NPJ6 270 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 KCNH7Q9NS40 1196 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 CAPN11Q9UMQ6 739 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 COL4A3BPQ9Y5P4 624 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 RASSF10A6NK89 507 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 ITGB5P18084 799 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 PTPRAP18433 802 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 WHAMMP3Q1A5X7 153 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 LRRC55Q6ZSA7 311 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 BANK1Q8NDB2 785 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 HSD17B14Q9BPX1 270 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 ACBD3Q9H3P7 528 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 TUFT1Q9NNX1 390 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 TCEAL9Q9UHQ7 104 aa15.56■□□□□ 0.08
LIMD1-202ENST00000440097 RNF40O75150 1001 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 FAM13AO94988 1023 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 LMNB1P20700 586 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 HOXA7P31268 230 aaPredicted RBP15.55■□□□□ 0.08
LIMD1-202ENST00000440097 ADAM9Q13443 819 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 GPIHBP1Q8IV16 184 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 WNK4Q96J92 1243 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 PRPF6O94906 941 aaKnown RBP15.55■□□□□ 0.08
LIMD1-202ENST00000440097 PLS1Q14651 629 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 RNF207Q6ZRF8 634 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 MYCT1Q8N699 235 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 DRC1Q96MC2 740 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 TAAR1Q96RJ0 339 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 RMDN3Q96TC7 470 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 LXNQ9BS40 222 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 SPON1Q9HCB6 807 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 PCDHA2Q9Y5H9 948 aa15.55■□□□□ 0.08
LIMD1-202ENST00000440097 VWA5AO00534 786 aa15.54■□□□□ 0.08
LIMD1-202ENST00000440097 NR2F2P24468 414 aa15.54■□□□□ 0.08
LIMD1-202ENST00000440097 GUCY2CP25092 1073 aa15.54■□□□□ 0.08
LIMD1-202ENST00000440097 MTMR1Q13613 665 aa15.54■□□□□ 0.08
LIMD1-202ENST00000440097 RINT1Q6NUQ1 792 aa15.54■□□□□ 0.08
LIMD1-202ENST00000440097 MIER3Q7Z3K6 550 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms