RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CRCPO75575 148 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 MMEP08473 750 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 CLTAP09496 248 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 ZNF131P52739 623 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 LRRC41Q15345 812 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 Q4G0T1 1027 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 CCNI2Q6ZMN8 369 aaPredicted RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 TMTC3Q6ZXV5 915 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 CCDC89Q8N998 374 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 PPP1R12CQ9BZL4 782 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 ACTR5Q9H9F9 607 aaPredicted RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 SEC31BQ9NQW1 1179 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 CCDC87Q9NVE4 849 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 SEL1LQ9UBV2 794 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 HPCAL4Q9UM19 191 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 CAPN11Q9UMQ6 739 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 FAM170AA1A519 330 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 GSG1L2A8MUP6 293 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 SLC26A4O43511 780 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 SUN1O94901 812 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 GAP43P17677 238 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 STIP1P31948 543 aaKnown RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 RCAN1P53805 252 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 EIF3BP55884 814 aaKnown RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 EIF6P56537 245 aaKnown RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 ARHGAP4P98171 946 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 SFSWAPQ12872 951 aaKnown RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 DPYDQ12882 1025 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 GLE1Q53GS7 698 aaKnown RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 NAA35Q5VZE5 725 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 NFRKBQ6P4R8 1299 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 TMC4Q7Z404 712 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 ADAT2Q7Z6V5 191 aaKnown RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 MAPKAPK5Q8IW41 473 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 MYCT1Q8N699 235 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 SPATA4Q8NEY3 305 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 ZC3H15Q8WU90 426 aaKnown RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 HVCN1Q96D96 273 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 OSBPL9Q96SU4 736 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 CLTCQ00610 1675 aaKnown RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 F8W031 263 aaPredicted RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 PFDN6O15212 129 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 ABCB4P21439 1286 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 FKBP3Q00688 224 aaKnown RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 PPP4R3CPQ6ZMV5 832 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 ARHGAP22Q7Z5H3 698 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 C14orf80Q86SX3 495 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 ENAHQ8N8S7 591 aaPredicted RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 TGFBRAP1Q8WUH2 860 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 LARP4BQ92615 738 aaKnown RBP6.88□□□□□ -1.31
BDNF-211ENST00000439476 HPS3Q969F9 1004 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 MAP3K14Q99558 947 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 LRRC1Q9BTT6 524 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 RETREG1Q9H6L5 497 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 PANK4Q9NVE7 773 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 RGL1Q9NZL6 768 aa6.88□□□□□ -1.31
BDNF-211ENST00000439476 GCNT3O95395 438 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 IRAK1P51617 712 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 ATP2C1P98194 919 aaPredicted RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 ADAM9Q13443 819 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 GNPTABQ3T906 1256 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 PREPLQ4J6C6 727 aaPredicted RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 FOXP4Q8IVH2 680 aaPredicted RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 MGARPQ8TDB4 240 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 CCDC17Q96LX7 622 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 CSRNP1Q96S65 589 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 SLC39A3Q9BRY0 314 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 POLR3CQ9BUI4 534 aaPredicted RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 ANKZF1Q9H8Y5 726 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 ZNF277Q9NRM2 450 aaPredicted RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 RAB20Q9NX57 234 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 ESYT3A0FGR9 886 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 CHUKO15111 745 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 EIF4BP23588 611 aaKnown RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 ASPHQ12797 758 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 PLS1Q14651 629 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 KCNB1Q14721 858 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 GPBP1Q86WP2 473 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 CCDC197Q8NCU1 140 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 VPS37AQ8NEZ2 397 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 VMP1Q96GC9 406 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 PBKQ96KB5 322 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.87□□□□□ -1.31
BDNF-211ENST00000439476 AZI2Q9H6S1 392 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 CD248Q9HCU0 757 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 NOVA2Q9UNW9 492 aaKnown RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 ZBTB1Q9Y2K1 713 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 LRRIQ3A6PVS8 624 aaPredicted RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 UBE2Q2LH0YL09 131 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 PGRMC1O00264 195 aaKnown RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 PSMD14O00487 310 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 DAPK3O43293 454 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 NCK2O43639 380 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 TPPPO94811 219 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 UFL1O94874 794 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 BDNFP23560 247 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 RCN1Q15293 331 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 UAP1Q16222 522 aaPredicted RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 SLC30A9Q6PML9 568 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms