RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CDC42EP5Q6NZY7 148 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 CERS5Q8N5B7 392 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 GDAP1Q8TB36 358 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 TBC1D22AQ8WUA7 517 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 SPDL1Q96EA4 605 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 ZCWPW1Q9H0M4 648 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 SH3GLB2Q9NR46 395 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 MYO1AQ9UBC5 1043 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 TPX2Q9ULW0 747 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 XIRP1Q702N8 1843 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 DISP2A7MBM2 1401 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 AFF2P51816 1311 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 DNM1LO00429 736 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 KRIT1O00522 736 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 TBCAO75347 108 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 GH2P01242 217 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 PLA2G4BP0C869 781 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 MDH1P40925 334 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 PLTPP55058 493 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 RHBDL3P58872 404 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 CDC37Q16543 378 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 ECM1Q16610 540 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 CYB5D1Q6P9G0 228 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 PHLDB2Q86SQ0 1253 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 PARP9Q8IXQ6 854 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 CCDC65Q8IXS2 484 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 GJD4Q96KN9 370 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 TCEAL9Q9UHQ7 104 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 ABCC6O95255 1503 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 COL4A1P02462 1669 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 RAD17O75943 681 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 FGFR1OPO95684 399 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 TUBBP07437 444 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 AARSP49588 968 aaKnown RBP eCLIP10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 TUBB2AQ13885 445 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 VPS72Q15906 364 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 PAPD7Q5XG87 772 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 RETREG2Q8NC44 543 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 HVCN1Q96D96 273 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 CEP89Q96ST8 783 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 MMTAG2Q9BU76 263 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 TUBB2BQ9BVA1 445 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 EPN3Q9H201 632 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 TBK1Q9UHD2 729 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 DDX20Q9UHI6 824 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 ZC3H4Q9UPT8 1303 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 NUP98P52948 1817 aa10.84□□□□□ -0.67
CDC42SE1-202ENST00000439374 SRGNP10124 158 aa10.83□□□□□ -0.67
CDC42SE1-202ENST00000439374 NR2F2P24468 414 aa10.83□□□□□ -0.67
CDC42SE1-202ENST00000439374 CYP2J2P51589 502 aa10.83□□□□□ -0.67
CDC42SE1-202ENST00000439374 COASYQ13057 564 aa10.83□□□□□ -0.67
CDC42SE1-202ENST00000439374 PNMA5Q96PV4 448 aa10.83□□□□□ -0.67
CDC42SE1-202ENST00000439374 TLR10Q9BXR5 811 aa10.83□□□□□ -0.67
CDC42SE1-202ENST00000439374 BHMT2Q9H2M3 363 aa10.83□□□□□ -0.67
CDC42SE1-202ENST00000439374 SH2D4AQ9H788 454 aa10.83□□□□□ -0.67
CDC42SE1-202ENST00000439374 YY1AP1Q9H869 796 aa10.83□□□□□ -0.67
CDC42SE1-202ENST00000439374 PKD1L3Q7Z443 1732 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 PNMA6FA0A0J9YX94 578 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 GOLGA6L10A0A0M3HER8 536 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 TTI1O43156 1089 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 PDHA1P08559 390 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 FGRP09769 529 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 PSMC6P62333 389 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 RPS6KA1Q15418 735 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 ARHGAP44Q17R89 818 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 GALNT17Q6IS24 598 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 SYCP3Q8IZU3 236 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 TAB3Q8N5C8 712 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 ZBTB10Q96DT7 871 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 ATP6V1G3Q96LB4 118 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 SPZ1Q9BXG8 430 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 VIPAS39Q9H9C1 493 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 BLOC1S4Q9NUP1 217 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 MYH14Q7Z406 1995 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 DDTLA6NHG4 134 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 TCP1P17987 556 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 CRKP46108 304 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 PPP4CP60510 307 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 MTM1Q13496 603 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 MYCT1Q8N699 235 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 RAD54LQ92698 747 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 AK8Q96MA6 479 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 KIF9Q9HAQ2 790 aa10.83□□□□□ -0.68
CDC42SE1-202ENST00000439374 A8MUI8 341 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 RSPH10B2B2RC85 870 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 ZBTB39O15060 712 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 DIAPH2O60879 1101 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 RSPH10BP0C881 870 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 ZNF543Q08ER8 600 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 TNIP1Q15025 636 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 ZFYVE27Q5T4F4 411 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 RC3H1Q5TC82 1133 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 SFMBT2Q5VUG0 894 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 GJB7Q6PEY0 223 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 NUP58Q9BVL2 599 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 PPP1R12CQ9BZL4 782 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 EMILIN3Q9NT22 766 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 TRIM33Q9UPN9 1127 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 SNX24Q9Y343 169 aa10.82□□□□□ -0.68
CDC42SE1-202ENST00000439374 PCNTO95613 3336 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms