RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ERVK-21P61565 698 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 MRPS9P82933 396 aaKnown RBP8.9□□□□□ -0.98
VPS50-204ENST00000438395 PPFIA1Q13136 1202 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 MBTPS1Q14703 1052 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 LAPTM4AQ15012 233 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 SLC35G1Q2M3R5 365 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 TIGD5Q53EQ6 642 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 PLEKHG4Q58EX7 1191 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 TAF2Q6P1X5 1199 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 HEATR3Q7Z4Q2 680 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 MICU3Q86XE3 530 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 IGDCC4Q8TDY8 1250 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 LMBR1Q8WVP7 490 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 APBB2Q92870 758 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 MAP4K1Q92918 833 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 TNPO1Q92973 898 aaKnown RBP8.9□□□□□ -0.98
VPS50-204ENST00000438395 WNT8BQ93098 351 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 GPRASP2Q96D09 838 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 GPR20Q99678 358 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 SENP7Q9BQF6 1050 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 LY9Q9HBG7 655 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 ANO2Q9NQ90 1003 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 FAM217BQ9NTX9 383 aaPredicted RBP8.9□□□□□ -0.98
VPS50-204ENST00000438395 SETD4Q9NVD3 440 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 FCF1Q9Y324 198 aaKnown RBP8.9□□□□□ -0.98
VPS50-204ENST00000438395 TAF6LQ9Y6J9 622 aa8.9□□□□□ -0.98
VPS50-204ENST00000438395 SCN5AQ14524 2016 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 M0QZ92 97 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 SH2B2O14492 632 aaPredicted RBP8.89□□□□□ -0.99
VPS50-204ENST00000438395 ZMYND10O75800 440 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 UPP2O95045 317 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 PLEKHA8P1O95397 391 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 RPLP2P05387 115 aaKnown RBP8.89□□□□□ -0.99
VPS50-204ENST00000438395 RXRAP19793 462 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 TCF7P36402 384 aaPredicted RBP8.89□□□□□ -0.99
VPS50-204ENST00000438395 MTMR1Q13613 665 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 GPNMBQ14956 572 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 TRAF7Q6Q0C0 670 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS50-204ENST00000438395 EP400NLQ6ZTU2 488 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 SPRED2Q7Z698 418 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 RNPEPQ9H4A4 650 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 AZI2Q9H6S1 392 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 UBE2ZQ9H832 354 aaPredicted RBP8.89□□□□□ -0.99
VPS50-204ENST00000438395 SUGCTQ9HAC7 445 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 ERAP1Q9NZ08 941 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 PKD2L1Q9P0L9 805 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 TUBE1Q9UJT0 475 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 FAM50BQ9Y247 325 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 BRWD1Q9NSI6 2320 aa8.89□□□□□ -0.99
VPS50-204ENST00000438395 MYH6P13533 1939 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 GBF1Q92538 1859 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 SLC27A2O14975 620 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 GHRP10912 638 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 KCNA5P22460 613 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 MARK3P27448 753 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 HOXC8P31273 242 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 CLCN1P35523 988 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 LIFRP42702 1097 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 FGD1P98174 961 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 UBE2SQ16763 222 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 TCTN1Q2MV58 587 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 ZNF598Q86UK7 904 aaKnown RBP8.88□□□□□ -0.99
VPS50-204ENST00000438395 RAB11FIP4Q86YS3 637 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 CCDC82Q8N4S0 544 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 SEPT1Q8WYJ6 367 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 MRPL38Q96DV4 380 aaKnown RBP8.88□□□□□ -0.99
VPS50-204ENST00000438395 SDF4Q9BRK5 362 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 C17orf80Q9BSJ5 609 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 ESYT1Q9BSJ8 1104 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 SMARCAD1Q9H4L7 1026 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 JPH1Q9HDC5 661 aaPredicted RBP8.88□□□□□ -0.99
VPS50-204ENST00000438395 TCEAL9Q9UHQ7 104 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 NAP1L2Q9ULW6 460 aaPredicted RBP8.88□□□□□ -0.99
VPS50-204ENST00000438395 KIAA1217Q5T5P2 1943 aa8.88□□□□□ -0.99
VPS50-204ENST00000438395 TET1Q8NFU7 2136 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 hCG_1642624A0A1W2PR95 340 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 MEIS2O14770 477 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 LPXNO60711 386 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 SSTR3P32745 418 aaPredicted RBP8.87□□□□□ -0.99
VPS50-204ENST00000438395 CTNNB1P35222 781 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 ADCY7P51828 1080 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 NAPAP54920 295 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 IGBP1P78318 339 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 HTRA4P83105 476 aaPredicted RBP8.87□□□□□ -0.99
VPS50-204ENST00000438395 SEMA3FQ13275 785 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 GPM6BQ13491 265 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 GRIK4Q16099 956 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 EPC2Q52LR7 807 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 CREB3L3Q68CJ9 461 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 TMTC3Q6ZXV5 915 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 CMTR1Q8N1G2 835 aaKnown RBP8.87□□□□□ -0.99
VPS50-204ENST00000438395 SRBD1Q8N5C6 995 aaKnown RBP8.87□□□□□ -0.99
VPS50-204ENST00000438395 FANCBQ8NB91 859 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 IL17RAQ96F46 866 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 C11orf84Q9BUA3 381 aaPredicted RBP8.87□□□□□ -0.99
VPS50-204ENST00000438395 BCAS3Q9H6U6 928 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 RBM28Q9NW13 759 aaKnown RBP8.87□□□□□ -0.99
VPS50-204ENST00000438395 HCN4Q9Y3Q4 1203 aa8.87□□□□□ -0.99
VPS50-204ENST00000438395 RWDD3Q9Y3V2 267 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms