RNA–Protein interactions for RNA: ENST00000437316.6

HLA-DQB2-232, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB2, Length 1,214 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-232ENST00000437316 CTSHP09668 335 aa16.11■□□□□ 0.17
HLA-DQB2-232ENST00000437316 SMAD3P84022 425 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB2-232ENST00000437316 CALCRLQ16602 461 aa16.11■□□□□ 0.17
HLA-DQB2-232ENST00000437316 TRIM71Q2Q1W2 868 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB2-232ENST00000437316 MAFBQ9Y5Q3 323 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQB2-232ENST00000437316 IGSF9BQ9UPX0 1349 aa16.11■□□□□ 0.17
HLA-DQB2-232ENST00000437316 MBLAC1A4D2B0 266 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQB2-232ENST00000437316 ATP2B1P20020 1258 aa16.1■□□□□ 0.17
HLA-DQB2-232ENST00000437316 ADAM17P78536 824 aa16.1■□□□□ 0.17
HLA-DQB2-232ENST00000437316 ORC2Q13416 577 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQB2-232ENST00000437316 IER5Q5VY09 327 aa16.1■□□□□ 0.17
HLA-DQB2-232ENST00000437316 MCTP1Q6DN14 999 aa16.1■□□□□ 0.17
HLA-DQB2-232ENST00000437316 CNKSR3Q6P9H4 555 aa16.1■□□□□ 0.17
HLA-DQB2-232ENST00000437316 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
HLA-DQB2-232ENST00000437316 NOSTRINQ8IVI9 506 aa16.1■□□□□ 0.17
HLA-DQB2-232ENST00000437316 FAM49AQ9H0Q0 323 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQB2-232ENST00000437316 KCNMB3Q9NPA1 279 aa16.1■□□□□ 0.17
HLA-DQB2-232ENST00000437316 FAM205CA6NFA0 338 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 SOX1O00570 391 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 EDIL3O43854 480 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 CD2BP2O95400 341 aaKnown RBP16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 OATP04181 439 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 GJB2P29033 226 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 TRAPPC10P48553 1259 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 PRKCEQ02156 737 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 PPP2R5CQ13362 524 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 IKBKEQ14164 716 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 HIC1Q14526 733 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 RAB30Q15771 203 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 C16orf59Q7L2K0 433 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 TRMT1LQ7Z2T5 733 aaKnown RBP16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 RPAINQ86UA6 219 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 SEPT8Q92599 483 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 WNT8BQ93098 351 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 GJA10Q969M2 543 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 LRCH3Q96II8 777 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 MSRAQ9UJ68 235 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 PCDHA2Q9Y5H9 948 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 WDR81Q562E7 1941 aa16.09■□□□□ 0.17
HLA-DQB2-232ENST00000437316 MAGEB2O15479 319 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 CXCL10P02778 98 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 ATP2A2P16615 1042 aaKnown RBP16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 PDCP20941 246 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 KLRC1P26715 233 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 TMOD1P28289 359 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 MCM7P33993 719 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 PSMC5P62195 406 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 EARS2Q5JPH6 523 aaKnown RBP16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 ZNF697Q5TEC3 545 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 NCAPH2Q6IBW4 605 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 RUFY4Q6ZNE9 571 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 TRAPPC12Q8WVT3 735 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 DNAJB3Q8WWF6 145 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 MAP7D2Q96T17 732 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 SLC9A7Q96T83 725 aa16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 SEPT9Q9UHD8 586 aaPredicted RBP16.08■□□□□ 0.16
HLA-DQB2-232ENST00000437316 LAMA3Q16787 3333 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 SMIM35A0A1B0GVV1 85 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 ABHD14A-ACY1A0A1B0GW23 586 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 NBNO60934 754 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 QARSP47897 775 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 MRPS6P82932 125 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 TMEM266Q2M3C6 531 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 XKR3Q5GH77 459 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 TTC38Q5R3I4 469 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 RASIP1Q5U651 963 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 MTHFD1LQ6UB35 978 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 NME8Q8N427 588 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 METTL13Q8N6R0 699 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 APBB2Q92870 758 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 CCDC43Q96MW1 224 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 VAV3Q9UKW4 847 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 PCDHA12Q9UN75 941 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 TET1Q8NFU7 2136 aa16.07■□□□□ 0.16
HLA-DQB2-232ENST00000437316 TMEM265A0A087WTH1 108 aa16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 KIF28PB7ZC32 967 aa16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 P4HBP07237 508 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 TBC1D8BQ0IIM8 1120 aa16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 FAM26DQ5JW98 314 aa16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 MARCH8Q5T0T0 291 aa16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 ZNF710Q8N1W2 664 aa16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 NEK9Q8TD19 979 aa16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 JPH2Q9BR39 696 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 TTC12Q9H892 705 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 CXXC1Q9P0U4 656 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 TRPV2Q9Y5S1 764 aa16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 CDY2AQ9Y6F7 541 aa16.06■□□□□ 0.16
HLA-DQB2-232ENST00000437316 DNAJB2P25686 324 aa16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 U2AF2P26368 475 aaKnown RBP eCLIP16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 TXKP42681 527 aa16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 DNM2P50570 870 aa16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 EPHA7Q15375 998 aa16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 UGCGQ16739 394 aa16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 ODR4Q5SWX8 454 aa16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 LARP1BQ659C4 914 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 FAM109BQ6ICB4 259 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 TRAF7Q6Q0C0 670 aa16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 B3GNT9Q6UX72 402 aa16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 HSCBQ8IWL3 235 aa16.05■□□□□ 0.16
HLA-DQB2-232ENST00000437316 EXOC8Q8IYI6 725 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms