RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 TJP3O95049 919 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 STRBPQ96SI9 672 aaKnown RBP17.09■□□□□ 0.33
PTPN13-204ENST00000436978 MID2Q9UJV3 735 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 ERCC6L2Q5T890 1561 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 FAM170AA1A519 330 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 POC1B-GALNT4F8VUJ3 575 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 GOLGA8SH3BPF8 625 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 FAM83BQ5T0W9 1011 aa17.08■□□□□ 0.33
PTPN13-204ENST00000436978 DEPDC1BQ8WUY9 529 aa17.08■□□□□ 0.33
PTPN13-204ENST00000436978 GDAP1L1Q96MZ0 367 aa17.08■□□□□ 0.33
PTPN13-204ENST00000436978 C2orf40Q9H1Z8 148 aa17.08■□□□□ 0.33
PTPN13-204ENST00000436978 UNC13DQ70J99 1090 aa17.08■□□□□ 0.33
PTPN13-204ENST00000436978 MTA3Q9BTC8 594 aa17.08■□□□□ 0.33
PTPN13-204ENST00000436978 PCDHA13Q9Y5I0 950 aa17.08■□□□□ 0.33
PTPN13-204ENST00000436978 LRRIQ1Q96JM4 1722 aa17.08■□□□□ 0.32
PTPN13-204ENST00000436978 KRT76Q01546 638 aa17.08■□□□□ 0.32
PTPN13-204ENST00000436978 TTC39CQ8N584 583 aa17.08■□□□□ 0.32
PTPN13-204ENST00000436978 STRIP2Q9ULQ0 834 aa17.08■□□□□ 0.32
PTPN13-204ENST00000436978 ATF5Q9Y2D1 282 aaPredicted RBP17.08■□□□□ 0.32
PTPN13-204ENST00000436978 PCGF5Q86SE9 256 aa17.08■□□□□ 0.32
PTPN13-204ENST00000436978 CALN1Q9BXU9 219 aa17.08■□□□□ 0.32
PTPN13-204ENST00000436978 PXDNLA1KZ92 1463 aa17.08■□□□□ 0.32
PTPN13-204ENST00000436978 DTNBO60941 627 aa17.08■□□□□ 0.32
PTPN13-204ENST00000436978 SEMA3FQ13275 785 aa17.08■□□□□ 0.32
PTPN13-204ENST00000436978 EEPD1Q7L9B9 569 aa17.08■□□□□ 0.32
PTPN13-204ENST00000436978 ZNF189O75820 626 aaPredicted RBP17.07■□□□□ 0.32
PTPN13-204ENST00000436978 RCSD1Q6JBY9 416 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 CPSF2Q9P2I0 782 aaKnown RBP17.07■□□□□ 0.32
PTPN13-204ENST00000436978 TLK1Q9UKI8 766 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 ZNF521Q96K83 1311 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 CLNS1AP54105 237 aaKnown RBP17.07■□□□□ 0.32
PTPN13-204ENST00000436978 TSTA3Q13630 321 aaPredicted RBP17.07■□□□□ 0.32
PTPN13-204ENST00000436978 HLFQ16534 295 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 PARD3BQ8TEW8 1205 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 AFF2P51816 1311 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 PMLP29590 882 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 FAM20AQ96MK3 541 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 TBXAS1P24557 533 aaPredicted RBP17.07■□□□□ 0.32
PTPN13-204ENST00000436978 PKP1Q13835 747 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 SLC35F6Q8N357 371 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 WHAMMQ8TF30 809 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 ATP6V1E2Q96A05 226 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 MMP19Q99542 508 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 CALB1P05937 261 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 PCDHB6Q9Y5E3 794 aa17.07■□□□□ 0.32
PTPN13-204ENST00000436978 CYP2D7A0A087X1C5 515 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 CLDN3O15551 220 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 HIP1RO75146 1068 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 PSMA2P25787 234 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 CUL1Q13616 776 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 C1orf228Q6PIY5 440 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 GPC4O75487 556 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 CTTNQ14247 550 aaKnown RBP17.06■□□□□ 0.32
PTPN13-204ENST00000436978 KCNV1Q6PIU1 500 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 NSUN6Q8TEA1 469 aaKnown RBP17.06■□□□□ 0.32
PTPN13-204ENST00000436978 NUDCD1Q96RS6 583 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 NDST4Q9H3R1 872 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 IPO5O00410 1097 aaKnown RBP17.06■□□□□ 0.32
PTPN13-204ENST00000436978 TSPY1Q01534 308 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 CACNB1Q02641 598 aaPredicted RBP17.06■□□□□ 0.32
PTPN13-204ENST00000436978 MAPK6Q16659 721 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 SYNGAP1Q96PV0 1343 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 WRNIP1Q96S55 665 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 RESTQ13127 1097 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 NAA35Q5VZE5 725 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 TUBB6Q9BUF5 446 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 INTS9Q9NV88 658 aaKnown RBP17.06■□□□□ 0.32
PTPN13-204ENST00000436978 HERC5Q9UII4 1024 aaKnown RBP17.06■□□□□ 0.32
PTPN13-204ENST00000436978 DENND3A2RUS2 1198 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 ATP8B1O43520 1251 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 NECTIN1Q15223 517 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 CATSPER4Q7RTX7 472 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 ZNF302Q9NR11 478 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 ATP1A2P50993 1020 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 ZNF667Q5HYK9 610 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 OR6B2Q6IFH4 312 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 ERICH1Q86X53 443 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 CD58P19256 250 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 OSTNP61366 133 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 PI16Q6UXB8 463 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 TRIM62Q9BVG3 475 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 SEL1LQ9UBV2 794 aa17.06■□□□□ 0.32
PTPN13-204ENST00000436978 SLC8A1P32418 973 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 PEX3P56589 373 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 VSTM4Q8IW00 320 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 BEST2Q8NFU1 509 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 BCL2L12Q9HB09 334 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 ZHX2Q9Y6X8 837 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 DIP2AQ14689 1571 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 USP17L10C9JJH3 530 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 ARPP19P56211 112 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 BASP1P80723 227 aaKnown RBP17.05■□□□□ 0.32
PTPN13-204ENST00000436978 GRM4Q14833 912 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 SNRNP48Q6IEG0 339 aaKnown RBP17.05■□□□□ 0.32
PTPN13-204ENST00000436978 FASTKD5Q7L8L6 764 aaKnown RBP17.05■□□□□ 0.32
PTPN13-204ENST00000436978 RABEP2Q9H5N1 569 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 TBC1D10BQ4KMP7 808 aaPredicted RBP17.05■□□□□ 0.32
PTPN13-204ENST00000436978 SYNE4Q8N205 404 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms