RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
UBE3B-203ENST00000434735 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.17□□□□□ -0.32e-12■■■■■ 49
UBE3B-203ENST00000434735 DYDC2Q96IM9 177 aa13.17□□□□□ -0.3
UBE3B-203ENST00000434735 ZNF512Q96ME7 567 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-203ENST00000434735 SAMD15Q9P1V8 674 aa13.17□□□□□ -0.3
UBE3B-203ENST00000434735 PCDHB12Q9Y5F1 795 aa13.17□□□□□ -0.3
UBE3B-203ENST00000434735 PLA2R1Q13018 1463 aa13.17□□□□□ -0.3
UBE3B-203ENST00000434735 PSMC2P35998 433 aaKnown RBP13.16□□□□□ -0.3
UBE3B-203ENST00000434735 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 SARNPP82979 210 aaKnown RBP13.16□□□□□ -0.3
UBE3B-203ENST00000434735 CDO1Q16878 200 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 CHST13Q8NET6 341 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 RAB3IPQ96QF0 476 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-203ENST00000434735 RAB23Q9ULC3 237 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 SLC16A4O15374 487 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 MAP7Q14244 749 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 CCDC121Q6ZUS5 278 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 EFCAB13Q8IY85 973 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 SEPT1Q8WYJ6 367 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 CLIC6Q96NY7 704 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 CYP21A2P08686 494 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 PLA2G4BP0C869 781 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 SP100P23497 879 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-203ENST00000434735 GPC3P51654 580 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 BPIFB4P59827 614 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 KIF23Q02241 960 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-203ENST00000434735 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 PPP2R3BQ9Y5P8 575 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 CPS1P31327 1500 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 MADDQ8WXG6 1647 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 RSPH10B2B2RC85 870 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 RSPH10BP0C881 870 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 GBP1P32455 592 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 DENND2CQ68D51 928 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 RINT1Q6NUQ1 792 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 TET3O43151 1660 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 PRR23AA6NEV1 266 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 AKR1B15C9JRZ8 316 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-203ENST00000434735 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
UBE3B-203ENST00000434735 LRRN2O75325 713 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 NR3C2P08235 984 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 ADORA2BP29275 332 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 KLHL40Q2TBA0 621 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 LRRC31Q6UY01 552 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 RFX6Q8HWS3 928 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 NMRK2Q9NPI5 230 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 PCDHA10Q9Y5I2 948 aa13.16□□□□□ -0.3
UBE3B-203ENST00000434735 CIB2O75838 187 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 ALDH1A3P47895 512 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 QARSP47897 775 aaKnown RBP13.15□□□□□ -0.3
UBE3B-203ENST00000434735 INHBEP58166 350 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 TYW1BQ6NUM6 668 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 BZW2Q9Y6E2 419 aaKnown RBP13.15□□□□□ -0.3
UBE3B-203ENST00000434735 ARHGEF40Q8TER5 1519 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.3
UBE3B-203ENST00000434735 CTAGE3PQ8IX95 158 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 NSUN4Q96CB9 384 aaKnown RBP13.15□□□□□ -0.3
UBE3B-203ENST00000434735 SH3BP1Q9Y3L3 701 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 KDM6AO15550 1401 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-203ENST00000434735 POLRMTO00411 1230 aaKnown RBP13.15□□□□□ -0.3
UBE3B-203ENST00000434735 RRP9O43818 475 aaKnown RBP13.15□□□□□ -0.3
UBE3B-203ENST00000434735 IVLP07476 585 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 RALAP11233 206 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 CYP4A22Q5TCH4 519 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 MLKLQ8NB16 471 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 DEFB118Q96PH6 123 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 TMEM260Q9NX78 707 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 ZC3H11AO75152 810 aaKnown RBP eCLIP13.15□□□□□ -0.3
UBE3B-203ENST00000434735 S100BP04271 92 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-203ENST00000434735 LGSNQ5TDP6 509 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 CCDC186Q7Z3E2 898 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 CCDC105Q8IYK2 499 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 SPATA17Q96L03 361 aa13.15□□□□□ -0.3
UBE3B-203ENST00000434735 LAD1O00515 517 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 BTG3Q14201 252 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-203ENST00000434735 UBLCP1Q8WVY7 318 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-203ENST00000434735 MRPL4Q9BYD3 311 aaKnown RBP13.14□□□□□ -0.31
UBE3B-203ENST00000434735 ANGPTL3Q9Y5C1 460 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 HMGB1P1B2RPK0 211 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-203ENST00000434735 MNAT1P51948 309 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 POLR2FP61218 127 aaKnown RBP13.14□□□□□ -0.31
UBE3B-203ENST00000434735 PSMC5P62195 406 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 NR5A1Q13285 461 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 DCLK2Q8N568 766 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 INTS4Q96HW7 963 aaKnown RBP13.14□□□□□ -0.31
UBE3B-203ENST00000434735 SH2B2O14492 632 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-203ENST00000434735 PFKFB2O60825 505 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 HMBSP08397 361 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 MAGEA1P43355 309 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 SEPT6Q14141 434 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 FYB2Q5VWT5 728 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 SDCCAG8Q86SQ7 713 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-203ENST00000434735 ZBTB9Q96C00 473 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 ACAP3Q96P50 834 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 NFE2L3Q9Y4A8 694 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 ZC3H4Q9UPT8 1303 aaKnown RBP13.14□□□□□ -0.31
UBE3B-203ENST00000434735 A8MXQ7 604 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 LAMC2Q13753 1193 aa13.14□□□□□ -0.31
UBE3B-203ENST00000434735 ZNF699Q32M78 642 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms