RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 MPHOSPH10O00566 681 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 ASAP2O43150 1006 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 PRPHP41219 470 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 EIF3BP55884 814 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 DR1Q01658 176 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 KCNK18Q7Z418 384 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 SLC17A8Q8NDX2 589 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 U2AF1L4Q8WU68 220 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 SH3GL3Q99963 347 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 BRIP1Q9BX63 1249 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 KCNK9Q9NPC2 374 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 PNMA3Q9UL41 463 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 DAAM1Q9Y4D1 1078 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 FGFR4P22455 802 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 ADAM9Q13443 819 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 ITIH4Q14624 930 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 CALCRLQ16602 461 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 DCAF17Q5H9S7 520 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 NUGGCQ68CJ6 796 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 MIS18BP1Q6P0N0 1132 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 PIGWQ7Z7B1 504 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 KSR1Q8IVT5 923 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 TPCN2Q8NHX9 752 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 ATXN2LQ8WWM7 1075 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 TLCD1Q96CP7 247 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 L3MBTL3Q96JM7 780 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 FGFBP2Q9BYJ0 223 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 DCP1AQ9NPI6 582 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 SEPT11Q9NVA2 429 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 NAGPAQ9UK23 515 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 TCP11X1B4DZS4 312 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 STXBP3O00186 592 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 GSTA1P08263 222 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 NCALDP61601 193 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 ATP11AP98196 1134 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 KCNH2Q12809 1159 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 SEMA3FQ13275 785 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 FBXO25Q8TCJ0 367 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 CALR3Q96L12 384 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 SEMA4AQ9H3S1 761 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 BARHL2Q9NY43 387 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 CPSF2Q9P2I0 782 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 CHD4Q14839 1912 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 ADAMTS7Q9UKP4 1686 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 PDHA1P08559 390 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 RARAP10276 462 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 LACTBP83111 547 aaPredicted RBP12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 ZNF268Q14587 947 aaPredicted RBP12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 ANKRD20A2Q5SQ80 823 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 ANKRD20A1Q5TYW2 823 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 ANKRD20A3Q5VUR7 823 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 SUSD4Q5VX71 490 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 KRT79Q5XKE5 535 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 EIF1ADQ8N9N8 165 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 GDAP1Q8TB36 358 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 RNF25Q96BH1 459 aaPredicted RBP12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 PNMA5Q96PV4 448 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 RAB17Q9H0T7 212 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 OSGEPQ9NPF4 335 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 SH3GLB2Q9NR46 395 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 KAT6BQ8WYB5 2073 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 KIF1AQ12756 1690 aa12.55□□□□□ -0.4
HMGCS1-202ENST00000433297 PVALEFA0A1B0GWK0 134 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 M0R2N6 131 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 ATP2A2P16615 1042 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 CCND1P24385 295 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 LLGL1Q15334 1064 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 HERC4Q5GLZ8 1057 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 SPTY2D1Q68D10 685 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 MARCH10Q8NA82 808 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 SYN2Q92777 582 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 SLITRK6Q9H5Y7 841 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 RIC8AQ9NPQ8 531 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 AMFRQ9UKV5 643 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 NPHP3-ACAD11A0A0J9YXS1 232 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 FOXO6A8MYZ6 492 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 KLRF2D3W0D1 207 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 SMNDC1O75940 238 aaKnown RBP eCLIP12.54□□□□□ -0.46e-7■■□□□ 13.7
HMGCS1-202ENST00000433297 KRT18P05783 430 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 H2AFZP0C0S5 128 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 TSPY3P0CV98 308 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 TSPY8P0CW00 308 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 TMEM266Q2M3C6 531 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 SLC35G1Q2M3R5 365 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 FAM26FQ5R3K3 315 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 H2AFVQ71UI9 128 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 OSBPL1AQ9BXW6 950 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 CRNKL1Q9BZJ0 848 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 MAD2L2Q9UI95 211 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 MYH7BA7E2Y1 1941 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 PCK1P35558 622 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 MSH2P43246 934 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 MMP13P45452 471 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 COASYQ13057 564 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 RIPK1Q13546 671 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 KRT25Q7Z3Z0 450 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 CEP120Q8N960 986 aa12.54□□□□□ -0.4
HMGCS1-202ENST00000433297 LRRC57Q8N9N7 239 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms