RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 FXR2P51116 673 aaKnown RBP eCLIP12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 CCL23P55773 120 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 PSMC5P62195 406 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 PRKCEQ02156 737 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 BFSP2Q13515 415 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 TMEM266Q2M3C6 531 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 TRIM71Q2Q1W2 868 aaKnown RBP12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 XKR3Q5GH77 459 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 ZNF484Q5JVG2 852 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 MFSD5Q6N075 450 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 FAM173BQ6P4H8 233 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 RETREG2Q8NC44 543 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 TRAPPC12Q8WVT3 735 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 WNT8BQ93098 351 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 FAM167AQ96KS9 214 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 HSD17B14Q9BPX1 270 aa12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 EIF2AK1Q9BQI3 630 aaKnown RBP12.47□□□□□ -0.41
SPTLC3-202ENST00000431275 COL1A2P08123 1366 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 DDX11L8A8MPP1 907 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 ZBTB42B2RXF5 422 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 PITPNM1O00562 1244 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 DKC1O60832 514 aaKnown RBP eCLIP12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 KLRC1P26715 233 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 ATP2C1P98194 919 aaPredicted RBP12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 CYP4A11Q02928 519 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 PKP1Q13835 747 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 CTTNQ14247 550 aaKnown RBP12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 PDIA5Q14554 519 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 SF3A1Q15459 793 aaKnown RBP12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 IL17AQ16552 155 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 FOXD4L5Q5VV16 416 aaPredicted RBP12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 MTHFD1LQ6UB35 978 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 DTHD1Q6ZMT9 781 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 TPH2Q8IWU9 490 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 CCDC155Q8N6L0 562 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 CAGE1Q8TC20 777 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 FOXD4L4Q8WXT5 416 aaPredicted RBP12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 ZBTB10Q96DT7 871 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 GDF15Q99988 308 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 LXNQ9BS40 222 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 NIFKQ9BYG3 293 aaKnown RBP12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 WNT8AQ9H1J5 351 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 ZSWIM4Q9H7M6 989 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 WRAP73Q9P2S5 460 aaPredicted RBP12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 TUBE1Q9UJT0 475 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 PCDHA2Q9Y5H9 948 aa12.46□□□□□ -0.41
SPTLC3-202ENST00000431275 BMP15O95972 392 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 IQCF3P0C7M6 154 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 CKBP12277 381 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 THPOP40225 353 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 RBL2Q08999 1139 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 ARL6IP4Q66PJ3 421 aaKnown RBP12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 TAF2Q6P1X5 1199 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 RUFY4Q6ZNE9 571 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 ANO5Q75V66 913 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 C4orf19Q8IY42 314 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 TMEM199Q8N511 208 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 IGSF22Q8N9C0 903 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 ERMNQ8TAM6 284 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 NEK9Q8TD19 979 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 SCLYQ96I15 445 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 RAB34Q9BZG1 259 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 LRWD1Q9UFC0 647 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 SEPT9Q9UHD8 586 aaPredicted RBP12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 CEP131Q9UPN4 1083 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 CLIC4Q9Y696 253 aa12.45□□□□□ -0.42
SPTLC3-202ENST00000431275 TMEM150BA6NC51 233 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 LYPLA2O95372 231 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 F13A1P00488 732 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 SPATA31C1P0DKV0 1188 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 CSF2RAP15509 400 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 SELPP16109 830 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 BMP8BP34820 402 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 FPGSQ05932 587 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 TARBP2Q15633 366 aaKnown RBP12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 ZNF618Q5T7W0 954 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 CATSPER3Q86XQ3 398 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 DNAJB3Q8WWF6 145 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 SH2D3AQ9BRG2 576 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 POLR3CQ9BUI4 534 aaPredicted RBP12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 FTOQ9C0B1 505 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 UBE2OQ9C0C9 1292 aaKnown RBP12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 TUFT1Q9NNX1 390 aa12.44□□□□□ -0.42
SPTLC3-202ENST00000431275 SMIM35A0A1B0GVV1 85 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 VWA3AA6NCI4 1184 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 RSPH10B2B2RC85 870 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 ZBTB39O15060 712 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 MAGEB2O15479 319 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 CAND2O75155 1236 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 MED24O75448 989 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 C22orf31O95567 290 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 RSPH10BP0C881 870 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 RPA1P27694 616 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 YWHABP31946 246 aaKnown RBP12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 EPHB4P54760 987 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 CEBPZQ03701 1054 aaKnown RBP12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 PPIGQ13427 754 aaKnown RBP eCLIP12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 PTPAQ15257 358 aa12.43□□□□□ -0.42
SPTLC3-202ENST00000431275 MTERF2Q49AM1 385 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms