RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SRBD1Q8N5C6 995 aaKnown RBP5.61□□□□□ -1.51
RIF1-203ENST00000428287 SLC7A6OSQ96CW6 309 aaPredicted RBP5.61□□□□□ -1.51
RIF1-203ENST00000428287 CNOT6LQ96LI5 555 aaKnown RBP5.61□□□□□ -1.51
RIF1-203ENST00000428287 ERP44Q9BS26 406 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 EURLQ9NYK6 297 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 SBF1O95248 1867 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 PARP14Q460N5 1801 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 PLSCR1O15162 318 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 ATP5HO75947 161 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 ARID4AP29374 1257 aaPredicted RBP5.61□□□□□ -1.51
RIF1-203ENST00000428287 PDE6BP35913 854 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 TTC38Q5R3I4 469 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 IFNL3Q8IZI9 196 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 TIPINQ9BVW5 301 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 EPB41L4AQ9HCS5 686 aaPredicted RBP5.61□□□□□ -1.51
RIF1-203ENST00000428287 WDR35Q9P2L0 1181 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 SUCLA2Q9P2R7 463 aaPredicted RBP5.61□□□□□ -1.51
RIF1-203ENST00000428287 MYO16Q9Y6X6 1858 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 TNS2Q63HR2 1409 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 C10orf71Q711Q0 1435 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 MACROD2A1Z1Q3 448 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 RARAP10276 462 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 ACADSP16219 412 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 GBP1P32455 592 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 HADHBP55084 474 aaKnown RBP5.61□□□□□ -1.51
RIF1-203ENST00000428287 KCNMA1Q12791 1236 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 WTAPQ15007 396 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 VWA3BQ502W6 1294 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 MYD88Q99836 296 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 CHCHD3Q9NX63 227 aaKnown RBP5.61□□□□□ -1.51
RIF1-203ENST00000428287 CTNND2Q9UQB3 1225 aa5.61□□□□□ -1.51
RIF1-203ENST00000428287 BZW2Q9Y6E2 419 aaKnown RBP5.61□□□□□ -1.51
RIF1-203ENST00000428287 COL1A1P02452 1464 aaPredicted RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 FAM205CA6NFA0 338 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 GFPT2O94808 682 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 GNAT2P19087 354 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 MTA1Q13330 715 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 C1orf141Q5JVX7 400 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 ANKRD40Q6AI12 368 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 COL23A1Q86Y22 540 aaPredicted RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 ENAHQ8N8S7 591 aaPredicted RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 KLHL29Q96CT2 875 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 IFT74Q96LB3 600 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 ATP8A2Q9NTI2 1148 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 PDCD11Q14690 1871 aaKnown RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 ZNF142P52746 1687 aaPredicted RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 ZNF831Q5JPB2 1677 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 PHF20L1A8MW92 1017 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 RXRAP19793 462 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 SLC1A4P43007 532 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 KIRREL3Q8IZU9 778 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 STAMQ92783 540 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 GRAMD1AQ96CP6 724 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 LRMDAQ9H2I8 198 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 ZMYND8Q9ULU4 1186 aaPredicted RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 USP20Q9Y2K6 914 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 CNTNAP5Q8WYK1 1306 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 RARGP13631 454 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 CTNNA1P35221 906 aaKnown RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 PSMC4P43686 418 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 CUL3Q13618 768 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 SLCO2A1Q92959 643 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 PLEKHG4BQ96PX9 1271 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 UBAC1Q9BSL1 405 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 NAPBQ9H115 298 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 RNF41Q9H4P4 317 aaPredicted RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 DOT1LQ8TEK3 1739 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 ESPL1Q14674 2120 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 PGRMC1O00264 195 aaKnown RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 HIP1RO75146 1068 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 SUN1O94901 812 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 HPDP32754 393 aaPredicted RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 PEX19P40855 299 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 UBA7P41226 1012 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 PEX5P50542 639 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 COPS2P61201 443 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 CCDC181Q5TID7 509 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 RAB17Q9H0T7 212 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 NEUROG2Q9H2A3 272 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 MLXIPQ9HAP2 919 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 ATP6V0A2Q9Y487 856 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 GTPBP10A4D1E9 387 aaKnown RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 KIAA0391O15091 583 aaKnown RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 RNF8O76064 485 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 FGFR2P21802 821 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 KLRC3Q07444 240 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 C6orf118Q5T5N4 469 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 UNC13DQ70J99 1090 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 ERICH1Q86X53 443 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 OLIG1Q8TAK6 271 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 FBXO25Q8TCJ0 367 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 MKL1Q969V6 931 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 RUNDC3BQ96NL0 473 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.6□□□□□ -1.516e-7■■■□□ 16.7
RIF1-203ENST00000428287 EPB41L1Q9H4G0 881 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 ASCC3Q8N3C0 2202 aaKnown RBP5.6□□□□□ -1.51
RIF1-203ENST00000428287 CABIN1Q9Y6J0 2220 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 ZNF536O15090 1300 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 TRIM49BA6NDI0 452 aa5.6□□□□□ -1.51
RIF1-203ENST00000428287 PEX11AO75192 247 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms