RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CACNA2D1P54289 1103 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 ARPC4P59998 168 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 NCALDP61601 193 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 MDM2Q00987 491 aaPredicted RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 EXOSC10Q01780 885 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 GOLGA8FQ08AF8 430 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZNF844Q08AG5 666 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 GOLGA8DPQ0D2H9 430 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 LSAMPQ13449 338 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 DCTN2Q13561 401 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 R3HDM1Q15032 1099 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 PPP2R5BQ15173 497 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 KRT31Q15323 416 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 AKNAD1Q5T1N1 836 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 MAP3K21Q5TCX8 1036 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 DENND2CQ68D51 928 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 THOC7Q6I9Y2 204 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 SHC4Q6S5L8 630 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 PPP1R21Q6ZMI0 780 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 ARHGEF18Q6ZSZ5 1173 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 OTUD6AQ7L8S5 288 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 VPS37DQ86XT2 251 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 IQCF2Q8IXL9 164 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 GSPT2Q8IYD1 628 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 KIRREL3Q8IZU9 778 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 SYCE1Q8N0S2 351 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 KLHDC4Q8TBB5 520 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 NEK9Q8TD19 979 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 CHMP7Q8WUX9 453 aaPredicted RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 SREK1Q8WXA9 508 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 TLCD1Q96CP7 247 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 CDK5RAP3Q96JB5 506 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 VPS50Q96JG6 964 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 NUDCD1Q96RS6 583 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 SLX1AQ9BQ83 275 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 TMEM109Q9BVC6 243 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 SPATA16Q9BXB7 569 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 PPP1R12CQ9BZL4 782 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 ROPN1BQ9BZX4 212 aaPredicted RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 BRD8Q9H0E9 1235 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 CCDC68Q9H2F9 335 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 FOXP1Q9H334 677 aaPredicted RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 Q9H521 79 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 NHEJ1Q9H9Q4 299 aaPredicted RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 ROPN1Q9HAT0 212 aaPredicted RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 MAGEF1Q9HAY2 307 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 KCNMB3Q9NPA1 279 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 ATP8A2Q9NTI2 1148 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 PANK4Q9NVE7 773 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 ADAM22Q9P0K1 906 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 DKK3Q9UBP4 350 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 MTRF1LQ9UGC7 380 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 CROTQ9UKG9 612 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 INTUQ9ULD6 942 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 PPP1R9AQ9ULJ8 1098 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 NOVA2Q9UNW9 492 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 NR2E3Q9Y5X4 410 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 MAP2P11137 1827 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 A0A0D9SFI3 127 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 SSU72P8A0A1W2PR75 194 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 MACROD2A1Z1Q3 448 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 F6X3S4 739 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 MAPK13O15264 365 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 AKR1B10O60218 316 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ECE2O60344 883 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 GDF9O60383 454 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 SNX3O60493 162 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZBED4O75132 1171 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZMYND10O75800 440 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 MBD4O95243 580 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 RAPGEF3O95398 923 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 GAS8O95995 478 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 POLR3DP05423 398 aaPredicted RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 RARAP10276 462 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 PORP16435 677 aaPredicted RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 HSPA6P17066 643 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 TMOD1P28289 359 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 HNRNPH3P31942 346 aaKnown RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ABL2P42684 1182 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 MMP13P45452 471 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 CDK7P50613 346 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 RCAN1P53805 252 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 MTTPP55157 894 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 OXCT1P55809 520 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 MAGOHP61326 146 aaKnown RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 PRR20EP86478 221 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 PRR20CP86479 221 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 PRR20DP86480 221 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 PRR20BP86481 221 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 PRR20AP86496 221 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ADCY1Q08828 1119 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 RCN2Q14257 317 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 PTPAQ15257 358 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 INF2Q27J81 1249 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 LONRF3Q496Y0 759 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 GALNTL6Q49A17 601 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 VWA3BQ502W6 1294 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 FAM133BQ5BKY9 247 aaKnown RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 SLC9C2Q5TAH2 1124 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZNF697Q5TEC3 545 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms