RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 ZC3H3Q8IXZ2 948 aaKnown RBP15.96■□□□□ 0.15
CDK3-201ENST00000425876 SHCBP1Q8NEM2 672 aa15.96■□□□□ 0.15
CDK3-201ENST00000425876 CNOT6LQ96LI5 555 aaKnown RBP15.96■□□□□ 0.15
CDK3-201ENST00000425876 CEP63Q96MT8 703 aa15.96■□□□□ 0.15
CDK3-201ENST00000425876 VPS16Q9H269 839 aa15.96■□□□□ 0.15
CDK3-201ENST00000425876 KCTD10Q9H3F6 313 aa15.96■□□□□ 0.15
CDK3-201ENST00000425876 TMX1Q9H3N1 280 aa15.96■□□□□ 0.15
CDK3-201ENST00000425876 MROH8Q9H579 483 aa15.96■□□□□ 0.15
CDK3-201ENST00000425876 KCND1Q9NSA2 647 aa15.96■□□□□ 0.15
CDK3-201ENST00000425876 PCDHA10Q9Y5I2 948 aa15.96■□□□□ 0.15
CDK3-201ENST00000425876 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.96■□□□□ 0.15
CDK3-201ENST00000425876 ASTN1O14525 1302 aa15.96■□□□□ 0.15
CDK3-201ENST00000425876 LOC102724159A0A0B4J2E5 919 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 ZBTB39O15060 712 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 FAM13AO94988 1023 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 DNM2P50570 870 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 CNTN2Q02246 1040 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 TRIM14Q14142 442 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 PWP2Q15269 919 aaKnown RBP15.96■□□□□ 0.14
CDK3-201ENST00000425876 EDRF1Q3B7T1 1238 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 C2orf69Q8N8R5 385 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 ZNF507Q8TCN5 953 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 MS4A4AQ96JQ5 239 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 MPHOSPH6Q99547 160 aaKnown RBP15.96■□□□□ 0.14
CDK3-201ENST00000425876 TUBGCP2Q9BSJ2 902 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 TIPINQ9BVW5 301 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 FGFBP2Q9BYJ0 223 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 ZHX3Q9H4I2 956 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 ZNF408Q9H9D4 720 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 PARVGQ9HBI0 331 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 TXNRD2Q9NNW7 524 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 ANKEF1Q9NU02 776 aa15.96■□□□□ 0.14
CDK3-201ENST00000425876 RSPH10B2B2RC85 870 aa15.95■□□□□ 0.14
CDK3-201ENST00000425876 EIF3DO15371 548 aaKnown RBP eCLIP15.95■□□□□ 0.14
CDK3-201ENST00000425876 RSPH10BP0C881 870 aa15.95■□□□□ 0.14
CDK3-201ENST00000425876 JPH1Q9HDC5 661 aaPredicted RBP15.95■□□□□ 0.14
CDK3-201ENST00000425876 TBC1D7Q9P0N9 293 aa15.95■□□□□ 0.14
CDK3-201ENST00000425876 TRAF3IP3Q9Y228 551 aa15.95■□□□□ 0.14
CDK3-201ENST00000425876 TRPM7Q96QT4 1865 aa15.95■□□□□ 0.14
CDK3-201ENST00000425876 UBE4BO95155 1302 aa15.95■□□□□ 0.14
CDK3-201ENST00000425876 SOWAHBA6NEL2 793 aa15.94■□□□□ 0.14
CDK3-201ENST00000425876 PDXKO00764 312 aa15.94■□□□□ 0.14
CDK3-201ENST00000425876 PEX10O60683 326 aa15.94■□□□□ 0.14
CDK3-201ENST00000425876 GNA14O95837 355 aa15.94■□□□□ 0.14
CDK3-201ENST00000425876 MTIF2P46199 727 aaKnown RBP15.94■□□□□ 0.14
CDK3-201ENST00000425876 RARRES1P49788 294 aa15.94■□□□□ 0.14
CDK3-201ENST00000425876 UBXN1Q04323 297 aa15.94■□□□□ 0.14
CDK3-201ENST00000425876 KNOP1Q1ED39 458 aaKnown RBP15.94■□□□□ 0.14
CDK3-201ENST00000425876 PADI6Q6TGC4 694 aa15.94■□□□□ 0.14
CDK3-201ENST00000425876 PPFIBP1Q86W92 1011 aa15.94■□□□□ 0.14
CDK3-201ENST00000425876 TC2NQ8N9U0 490 aa15.94■□□□□ 0.14
CDK3-201ENST00000425876 MRPL44Q9H9J2 332 aaKnown RBP15.94■□□□□ 0.14
CDK3-201ENST00000425876 SLC9A2Q9UBY0 812 aa15.94■□□□□ 0.14
CDK3-201ENST00000425876 DNAJC25-GNG10A0A024R161 153 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 AKR1B15C9JRZ8 316 aaPredicted RBP15.93■□□□□ 0.14
CDK3-201ENST00000425876 OFD1O75665 1012 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 PSAPP07602 524 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 ZBTB48P10074 688 aaPredicted RBP15.93■□□□□ 0.14
CDK3-201ENST00000425876 TGFB3P10600 412 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 MAPTP10636 758 aaKnown RBP15.93■□□□□ 0.14
CDK3-201ENST00000425876 YWHABP31946 246 aaKnown RBP15.93■□□□□ 0.14
CDK3-201ENST00000425876 MARSP56192 900 aaKnown RBP15.93■□□□□ 0.14
CDK3-201ENST00000425876 ERVK-9P63128 1117 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 ERVK-24P63145 666 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 Q3C1V9 767 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 STXBP4Q6ZWJ1 553 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 ANKRD23Q86SG2 305 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 CREBRFQ8IUR6 639 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 ATP6V0A1Q93050 837 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 CCDC51Q96ER9 411 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 PANX2Q96RD6 677 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 KIAA1217Q5T5P2 1943 aa15.93■□□□□ 0.14
CDK3-201ENST00000425876 CELF2O95319 508 aaKnown RBP15.92■□□□□ 0.14
CDK3-201ENST00000425876 TPM1P09493 284 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 PRKCSHP14314 528 aaPredicted RBP15.92■□□□□ 0.14
CDK3-201ENST00000425876 CASP5P51878 434 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 MAPK7Q13164 816 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 KCTD2Q14681 263 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 MAN2A1Q16706 1144 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 UGCGQ16739 394 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 PTPN21Q16825 1174 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 ABHD15Q6UXT9 468 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 CNGA4Q8IV77 575 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 NELFCDQ8IXH7 590 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 MYCT1Q8N699 235 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 FIZ1Q96SL8 496 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 MMP19Q99542 508 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 NOC4LQ9BVI4 516 aaKnown RBP15.92■□□□□ 0.14
CDK3-201ENST00000425876 CCL15-CCL14A0A0B4J2E2 113 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 CALUO43852 315 aaPredicted RBP15.92■□□□□ 0.14
CDK3-201ENST00000425876 STX10O60499 249 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 ATG7O95352 703 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 MYBP10242 640 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 HOXD13P35453 343 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 GCLCP48506 637 aaPredicted RBP15.92■□□□□ 0.14
CDK3-201ENST00000425876 ACTR2P61160 394 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 CCNA1P78396 465 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 NFIL3Q16649 462 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 CCL15Q16663 113 aa15.92■□□□□ 0.14
CDK3-201ENST00000425876 MIIPQ5JXC2 388 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms