RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CTTNQ14247 550 aaKnown RBP27.47■■□□□ 1.99
VEGFA-209ENST00000425836 SH3RF1Q7Z6J0 888 aa27.47■■□□□ 1.99
VEGFA-209ENST00000425836 FAM167AQ96KS9 214 aa27.47■■□□□ 1.99
VEGFA-209ENST00000425836 LXNQ9BS40 222 aa27.47■■□□□ 1.99
VEGFA-209ENST00000425836 RAB34Q9BZG1 259 aa27.47■■□□□ 1.99
VEGFA-209ENST00000425836 LRWD1Q9UFC0 647 aa27.47■■□□□ 1.99
VEGFA-209ENST00000425836 VWA3AA6NCI4 1184 aa27.46■■□□□ 1.99
VEGFA-209ENST00000425836 GNAT1P11488 350 aa27.46■■□□□ 1.99
VEGFA-209ENST00000425836 SLC39A14Q15043 492 aa27.46■■□□□ 1.99
VEGFA-209ENST00000425836 TPH2Q8IWU9 490 aa27.46■■□□□ 1.99
VEGFA-209ENST00000425836 NEK9Q8TD19 979 aa27.46■■□□□ 1.99
VEGFA-209ENST00000425836 NRBP2Q9NSY0 501 aa27.46■■□□□ 1.99
VEGFA-209ENST00000425836 TMEM39AQ9NV64 488 aa27.46■■□□□ 1.99
VEGFA-209ENST00000425836 RRN3P2A6NIE6 340 aa27.45■■□□□ 1.99
VEGFA-209ENST00000425836 TREHO43280 583 aa27.45■■□□□ 1.99
VEGFA-209ENST00000425836 SPATA31C1P0DKV0 1188 aa27.45■■□□□ 1.99
VEGFA-209ENST00000425836 XKR3Q5GH77 459 aa27.45■■□□□ 1.99
VEGFA-209ENST00000425836 MARCH8Q5T0T0 291 aa27.45■■□□□ 1.99
VEGFA-209ENST00000425836 ERMNQ8TAM6 284 aa27.45■■□□□ 1.99
VEGFA-209ENST00000425836 ZSWIM4Q9H7M6 989 aa27.45■■□□□ 1.99
VEGFA-209ENST00000425836 TBX21Q9UL17 535 aa27.45■■□□□ 1.99
VEGFA-209ENST00000425836 NOD1Q9Y239 953 aa27.45■■□□□ 1.99
VEGFA-209ENST00000425836 NR2E3Q9Y5X4 410 aa27.45■■□□□ 1.99
VEGFA-209ENST00000425836 TRIM43BA6NCK2 446 aa27.44■■□□□ 1.98
VEGFA-209ENST00000425836 ZBTB42B2RXF5 422 aa27.44■■□□□ 1.98
VEGFA-209ENST00000425836 DKC1O60832 514 aaKnown RBP eCLIP27.44■■□□□ 1.98
VEGFA-209ENST00000425836 CYP2C9P11712 490 aa27.44■■□□□ 1.98
VEGFA-209ENST00000425836 MARCKSP29966 332 aaPredicted RBP27.44■■□□□ 1.98
VEGFA-209ENST00000425836 IGBP1P78318 339 aa27.44■■□□□ 1.98
VEGFA-209ENST00000425836 DNM1Q05193 864 aaKnown RBP27.44■■□□□ 1.98
VEGFA-209ENST00000425836 ATL3Q6DD88 541 aa27.44■■□□□ 1.98
VEGFA-209ENST00000425836 C4orf19Q8IY42 314 aa27.44■■□□□ 1.98
VEGFA-209ENST00000425836 LINC00301Q8NCQ3 95 aa27.44■■□□□ 1.98
VEGFA-209ENST00000425836 TRAPPC12Q8WVT3 735 aa27.44■■□□□ 1.98
VEGFA-209ENST00000425836 TRIM43Q96BQ3 446 aaPredicted RBP27.44■■□□□ 1.98
VEGFA-209ENST00000425836 PRDM5Q9NQX1 630 aaPredicted RBP27.44■■□□□ 1.98
VEGFA-209ENST00000425836 MORC2Q9Y6X9 1032 aaPredicted RBP27.44■■□□□ 1.98
VEGFA-209ENST00000425836 PP2D1A8MPX8 630 aa27.43■■□□□ 1.98
VEGFA-209ENST00000425836 MED24O75448 989 aa27.43■■□□□ 1.98
VEGFA-209ENST00000425836 ZNF484Q5JVG2 852 aa27.43■■□□□ 1.98
VEGFA-209ENST00000425836 CATSPER3Q86XQ3 398 aa27.43■■□□□ 1.98
VEGFA-209ENST00000425836 POLR3CQ9BUI4 534 aaPredicted RBP27.43■■□□□ 1.98
VEGFA-209ENST00000425836 MBLAC1A4D2B0 266 aaPredicted RBP27.43■■□□□ 1.98
VEGFA-209ENST00000425836 DDX11L8A8MPP1 907 aa27.43■■□□□ 1.98
VEGFA-209ENST00000425836 KIAA0355O15063 1070 aa27.43■■□□□ 1.98
VEGFA-209ENST00000425836 CDC25AP30304 524 aa27.43■■□□□ 1.98
VEGFA-209ENST00000425836 GRIN1Q05586 938 aa27.43■■□□□ 1.98
VEGFA-209ENST00000425836 ANO5Q75V66 913 aa27.43■■□□□ 1.98
VEGFA-209ENST00000425836 ZBTB10Q96DT7 871 aa27.43■■□□□ 1.98
VEGFA-209ENST00000425836 NIFKQ9BYG3 293 aaKnown RBP27.43■■□□□ 1.98
VEGFA-209ENST00000425836 TUFT1Q9NNX1 390 aa27.43■■□□□ 1.98
VEGFA-209ENST00000425836 FBXO2Q9UK22 296 aaPredicted RBP27.43■■□□□ 1.98
VEGFA-209ENST00000425836 ZMYND8Q9ULU4 1186 aaPredicted RBP27.43■■□□□ 1.98
VEGFA-209ENST00000425836 ALPK3Q96L96 1907 aa27.42■■□□□ 1.98
VEGFA-209ENST00000425836 TMEM150BA6NC51 233 aa27.42■■□□□ 1.98
VEGFA-209ENST00000425836 LYPLA2O95372 231 aa27.42■■□□□ 1.98
VEGFA-209ENST00000425836 RPA1P27694 616 aa27.42■■□□□ 1.98
VEGFA-209ENST00000425836 PTK7Q13308 1070 aa27.42■■□□□ 1.98
VEGFA-209ENST00000425836 STK38Q15208 465 aa27.42■■□□□ 1.98
VEGFA-209ENST00000425836 HAUS3Q68CZ6 603 aa27.42■■□□□ 1.98
VEGFA-209ENST00000425836 SERINC5Q86VE9 423 aa27.42■■□□□ 1.98
VEGFA-209ENST00000425836 DHX38Q92620 1227 aaKnown RBP27.42■■□□□ 1.98
VEGFA-209ENST00000425836 SEPT9Q9UHD8 586 aaPredicted RBP27.42■■□□□ 1.98
VEGFA-209ENST00000425836 SRPRBQ9Y5M8 271 aaKnown RBP27.42■■□□□ 1.98
VEGFA-209ENST00000425836 STK24Q9Y6E0 443 aa27.42■■□□□ 1.98
VEGFA-209ENST00000425836 COL1A2P08123 1366 aa27.41■■□□□ 1.98
VEGFA-209ENST00000425836 ZBTB39O15060 712 aa27.41■■□□□ 1.98
VEGFA-209ENST00000425836 YEATS4O95619 227 aa27.41■■□□□ 1.98
VEGFA-209ENST00000425836 SYN1P17600 705 aa27.41■■□□□ 1.98
VEGFA-209ENST00000425836 WNT8BQ93098 351 aa27.41■■□□□ 1.98
VEGFA-209ENST00000425836 CHAMP1Q96JM3 812 aa27.41■■□□□ 1.98
VEGFA-209ENST00000425836 MMTAG2Q9BU76 263 aaKnown RBP27.41■■□□□ 1.98
VEGFA-209ENST00000425836 PCDH10Q9P2E7 1040 aa27.41■■□□□ 1.98
VEGFA-209ENST00000425836 PRKAG2Q9UGJ0 569 aa27.41■■□□□ 1.98
VEGFA-209ENST00000425836 TUBE1Q9UJT0 475 aa27.41■■□□□ 1.98
VEGFA-209ENST00000425836 CIZ1Q9ULV3 898 aaPredicted RBP27.41■■□□□ 1.98
VEGFA-209ENST00000425836 ATP6V1DQ9Y5K8 247 aa27.41■■□□□ 1.98
VEGFA-209ENST00000425836 YWHABP31946 246 aaKnown RBP27.4■■□□□ 1.98
VEGFA-209ENST00000425836 CCT6AP40227 531 aaKnown RBP27.4■■□□□ 1.98
VEGFA-209ENST00000425836 TARBP2Q15633 366 aaKnown RBP27.4■■□□□ 1.98
VEGFA-209ENST00000425836 KRT79Q5XKE5 535 aa27.4■■□□□ 1.98
VEGFA-209ENST00000425836 SNX29Q8TEQ0 813 aa27.4■■□□□ 1.98
VEGFA-209ENST00000425836 NOC4LQ9BVI4 516 aaKnown RBP27.4■■□□□ 1.98
VEGFA-209ENST00000425836 CFAP45Q9UL16 551 aa27.4■■□□□ 1.98
VEGFA-209ENST00000425836 SPTLC2O15270 562 aa27.39■■□□□ 1.98
VEGFA-209ENST00000425836 ITGB8P26012 769 aa27.39■■□□□ 1.98
VEGFA-209ENST00000425836 KLRC1P26715 233 aa27.39■■□□□ 1.98
VEGFA-209ENST00000425836 LONP1P36776 959 aaKnown RBP27.39■■□□□ 1.98
VEGFA-209ENST00000425836 ECM1Q16610 540 aa27.39■■□□□ 1.98
VEGFA-209ENST00000425836 PLA2G4FQ68DD2 849 aa27.39■■□□□ 1.98
VEGFA-209ENST00000425836 MTHFD1LQ6UB35 978 aa27.39■■□□□ 1.98
VEGFA-209ENST00000425836 RUFY4Q6ZNE9 571 aa27.39■■□□□ 1.98
VEGFA-209ENST00000425836 AK8Q96MA6 479 aa27.39■■□□□ 1.98
VEGFA-209ENST00000425836 SH2D3AQ9BRG2 576 aa27.39■■□□□ 1.98
VEGFA-209ENST00000425836 HIPK3Q9H422 1215 aa27.39■■□□□ 1.98
VEGFA-209ENST00000425836 A0A087WWV3 80 aa27.39■■□□□ 1.97
VEGFA-209ENST00000425836 TRIM71Q2Q1W2 868 aaKnown RBP27.39■■□□□ 1.97
VEGFA-209ENST00000425836 MTERF2Q49AM1 385 aa27.39■■□□□ 1.97
VEGFA-209ENST00000425836 CLIC6Q96NY7 704 aa27.39■■□□□ 1.97
VEGFA-209ENST00000425836 IPO9Q96P70 1041 aaKnown RBP27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms