RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 MPHOSPH10O00566 681 aaKnown RBP15.52■□□□□ 0.08
TPM3P9-201ENST00000424846 CETN3O15182 167 aa15.52■□□□□ 0.08
TPM3P9-201ENST00000424846 SHMT1P34896 483 aa15.52■□□□□ 0.08
TPM3P9-201ENST00000424846 TNNC1P63316 161 aa15.52■□□□□ 0.08
TPM3P9-201ENST00000424846 ZNF844Q08AG5 666 aa15.52■□□□□ 0.08
TPM3P9-201ENST00000424846 GIT2Q14161 759 aa15.52■□□□□ 0.08
TPM3P9-201ENST00000424846 TCERG1LQ5VWI1 586 aa15.52■□□□□ 0.08
TPM3P9-201ENST00000424846 ZNF713Q8N859 430 aaPredicted RBP15.52■□□□□ 0.08
TPM3P9-201ENST00000424846 TPCN2Q8NHX9 752 aa15.52■□□□□ 0.08
TPM3P9-201ENST00000424846 KCNMB3Q9NPA1 279 aa15.52■□□□□ 0.08
TPM3P9-201ENST00000424846 SIX2Q9NPC8 291 aa15.52■□□□□ 0.08
TPM3P9-201ENST00000424846 RIMBP2O15034 1052 aa15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 ZBTB5O15062 677 aa15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 MEFVO15553 781 aaPredicted RBP15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 TTLL1O95922 423 aa15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 GUCY2CP25092 1073 aa15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 CYP4A11Q02928 519 aa15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 QPCTQ16769 361 aa15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 RC3H1Q5TC82 1133 aaKnown RBP15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 ZFPM1Q8IX07 1006 aa15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 OSGEPQ9NPF4 335 aa15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 LUC7LQ9NQ29 371 aaKnown RBP15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 BCCIPQ9P287 314 aaKnown RBP eCLIP15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 FBXL5Q9UKA1 691 aa15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 ATAD5Q96QE3 1844 aa15.52■□□□□ 0.07
TPM3P9-201ENST00000424846 FRMD3A2A2Y4 597 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 DDX3XO00571 662 aaKnown RBP eCLIP15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 TTI1O43156 1089 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 SCNN1DP51172 638 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 SPIRE1Q08AE8 756 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 SEPT2Q15019 361 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 EXOC3L4Q17RC7 722 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 QRICH1Q2TAL8 776 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 ARHGAP27Q6ZUM4 889 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 ADAT2Q7Z6V5 191 aaKnown RBP15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 CERS5Q8N5B7 392 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 OLIG1Q8TAK6 271 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 FAM163AQ96GL9 167 aaPredicted RBP15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 NT5C3AQ9H0P0 336 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 ARMCX3Q9UH62 379 aaPredicted RBP15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 GGA1Q9UJY5 639 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 GNA14O95837 355 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 SPATA31C1P0DKV0 1188 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 MRPL12P52815 198 aaKnown RBP15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 IFT88Q13099 833 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 PRR16Q569H4 304 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 OTUD6BQ8N6M0 293 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 TRIM31Q9BZY9 425 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 DPH5Q9H2P9 285 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 PLCB1Q9NQ66 1216 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 PLIN4Q96Q06 1357 aa15.51■□□□□ 0.07
TPM3P9-201ENST00000424846 PLCG2P16885 1265 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 EPHA7Q15375 998 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 EMC10Q5UCC4 262 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 C15orf52Q6ZUT6 534 aaKnown RBP15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 KSR1Q8IVT5 923 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 CYP2W1Q8TAV3 490 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 TBC1D16Q8TBP0 767 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 IGSF9BQ9UPX0 1349 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 C6orf229H3BNL8 230 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 AFPP02771 609 aaKnown RBP15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 CTNNA1P35221 906 aaKnown RBP15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 RNF187Q5TA31 235 aaPredicted RBP15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 SUGP1Q8IWZ8 645 aaKnown RBP15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 RPGRQ92834 1020 aaKnown RBP15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 TRIM51Q9BSJ1 452 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 ANO3Q9BYT9 981 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 NENFQ9UMX5 172 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 PCDHAC2Q9Y5I4 1007 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 KDM3AQ9Y4C1 1321 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 KRIT1O00522 736 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 GFPT2O94808 682 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 NFIAQ12857 509 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 EDRF1Q3B7T1 1238 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 ACTRT1Q8TDG2 376 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 U2AF1L4Q8WU68 220 aaKnown RBP15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 UBLCP1Q8WVY7 318 aaPredicted RBP15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 SLC12A6Q9UHW9 1150 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 SERPINB13Q9UIV8 391 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 BCS1LQ9Y276 419 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 PCDHB13Q9Y5F0 798 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 PCDHA1Q9Y5I3 950 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 ADAMTSL1Q8N6G6 1762 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 SMCHD1A6NHR9 2005 aa15.5■□□□□ 0.07
TPM3P9-201ENST00000424846 ASTN1O14525 1302 aa15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 HMGB1P1B2RPK0 211 aaPredicted RBP15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 BHMG1C9JSJ3 638 aaPredicted RBP15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 MEIS2O14770 477 aa15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 CACNB3P54284 484 aa15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 SF3A3Q12874 501 aaKnown RBP eCLIP15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 KNOP1Q1ED39 458 aaKnown RBP15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 UBAP2Q5T6F2 1119 aaKnown RBP15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 FAM196AQ6ZSG2 479 aa15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 B4GALNT4Q76KP1 1039 aa15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 CNPY4Q8N129 248 aa15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 PRPF38AQ8NAV1 312 aaKnown RBP15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 LNX1Q8TBB1 728 aaPredicted RBP15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 SLC35C1Q96A29 364 aa15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 RUSC1Q9BVN2 902 aa15.49■□□□□ 0.07
TPM3P9-201ENST00000424846 STXBP5LQ9Y2K9 1186 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms