RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 M0QZ92 97 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 PSMD10O75832 226 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 ATG7O95352 703 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 RFC2P35250 354 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 SLC26A2P50443 739 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 TMEM62Q0P6H9 643 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 FOXD4L5Q5VV16 416 aaPredicted RBP10.89□□□□□ -0.67
HERC3-204ENST00000422770 PPP4R3AQ6IN85 833 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 RUFY4Q6ZNE9 571 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 BANK1Q8NDB2 785 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 TET1Q8NFU7 2136 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 FBXO18Q8NFZ0 1043 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 ETNPPLQ8TBG4 499 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 DNAJB3Q8WWF6 145 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 FOXD4L4Q8WXT5 416 aaPredicted RBP10.89□□□□□ -0.67
HERC3-204ENST00000422770 TNFRSF25Q93038 417 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 SEPT9Q9UHD8 586 aaPredicted RBP10.89□□□□□ -0.67
HERC3-204ENST00000422770 MICAL3Q7RTP6 2002 aa10.89□□□□□ -0.67
HERC3-204ENST00000422770 PTPRSQ13332 1948 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 KIF28PB7ZC32 967 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 RBAK-RBAKDNI3L0D1 243 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 HBP1O60381 514 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 PFKMP08237 780 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 TXKP42681 527 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 KCNJ6P48051 423 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 PRKCEQ02156 737 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 UGCGQ16739 394 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 C16orf59Q7L2K0 433 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 NOSTRINQ8IVI9 506 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 SLFN12Q8IYM2 578 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 METTL13Q8N6R0 699 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 ATP8B4Q8TF62 1192 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 FAM167AQ96KS9 214 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 FAM20AQ96MK3 541 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 MBOAT7Q96N66 472 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 PPP1R16BQ96T49 567 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 FOXP1Q9H334 677 aaPredicted RBP10.88□□□□□ -0.67
HERC3-204ENST00000422770 GINS2Q9Y248 185 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 SLC4A7Q9Y6M7 1214 aa10.88□□□□□ -0.67
HERC3-204ENST00000422770 IGSF9BQ9UPX0 1349 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 IGKV6D-21A0A0A0MT36 114 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 WNT7AO00755 349 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 OATP04181 439 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 KLRC1P26715 233 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 ZNF174Q15697 407 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 TRIM71Q2Q1W2 868 aaKnown RBP10.87□□□□□ -0.67
HERC3-204ENST00000422770 LRIT3Q3SXY7 679 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 MTERF2Q49AM1 385 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 TTC38Q5R3I4 469 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 LARP1BQ659C4 914 aaKnown RBP10.87□□□□□ -0.67
HERC3-204ENST00000422770 TAF2Q6P1X5 1199 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 MTHFD1LQ6UB35 978 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 RDM1Q8NG50 284 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 BBXQ8WY36 941 aaPredicted RBP10.87□□□□□ -0.67
HERC3-204ENST00000422770 CCDC43Q96MW1 224 aaKnown RBP10.87□□□□□ -0.67
HERC3-204ENST00000422770 SCLT1Q96NL6 688 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 KCNMB3Q9NPA1 279 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 NRBP2Q9NSY0 501 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 CHMP5Q9NZZ3 219 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 CXXC1Q9P0U4 656 aaPredicted RBP10.87□□□□□ -0.67
HERC3-204ENST00000422770 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
HERC3-204ENST00000422770 COL1A2P08123 1366 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 SZT2Q5T011 3432 aa10.87□□□□□ -0.67
HERC3-204ENST00000422770 DDX11L8A8MPP1 907 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 GRXCR1A8MXD5 290 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 EML1O00423 815 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 TBX3O15119 743 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 NBNO60934 754 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 PARNO95453 639 aaKnown RBP10.86□□□□□ -0.67
HERC3-204ENST00000422770 PDCP20941 246 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 IBSPP21815 317 aaPredicted RBP10.86□□□□□ -0.67
HERC3-204ENST00000422770 HOXC8P31273 242 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 MRPS6P82932 125 aaKnown RBP10.86□□□□□ -0.67
HERC3-204ENST00000422770 CYP4A11Q02928 519 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 PPP2R5CQ13362 524 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 PKP1Q13835 747 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 NBR1Q14596 966 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 ZNF484Q5JVG2 852 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 MARCH8Q5T0T0 291 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 CNKSR3Q6P9H4 555 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 HERVK_113Q902F9 699 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 HAS1Q92839 578 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 FAM161BQ96MY7 647 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 TTC12Q9H892 705 aaPredicted RBP10.86□□□□□ -0.67
HERC3-204ENST00000422770 VAV3Q9UKW4 847 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 PCDHA12Q9UN75 941 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 CEP131Q9UPN4 1083 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 MAFBQ9Y5Q3 323 aaPredicted RBP10.86□□□□□ -0.67
HERC3-204ENST00000422770 CDY2AQ9Y6F7 541 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 MYH15Q9Y2K3 1946 aa10.86□□□□□ -0.67
HERC3-204ENST00000422770 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.85□□□□□ -0.67
HERC3-204ENST00000422770 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.85□□□□□ -0.67
HERC3-204ENST00000422770 MBLAC1A4D2B0 266 aaPredicted RBP10.85□□□□□ -0.67
HERC3-204ENST00000422770 TMEM150BA6NC51 233 aa10.85□□□□□ -0.67
HERC3-204ENST00000422770 STX6O43752 255 aa10.85□□□□□ -0.67
HERC3-204ENST00000422770 ZNF862O60290 1169 aa10.85□□□□□ -0.67
HERC3-204ENST00000422770 DKC1O60832 514 aaKnown RBP eCLIP10.85□□□□□ -0.67
HERC3-204ENST00000422770 CAND2O75155 1236 aa10.85□□□□□ -0.67
HERC3-204ENST00000422770 OR52Z1P0C646 297 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms