RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 HSPD1P10809 573 aaKnown RBP10.53□□□□□ -0.72
TRIM39-206ENST00000420746 PDHBP11177 359 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 PPM1AP35813 382 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 SARSP49591 514 aaKnown RBP10.53□□□□□ -0.72
TRIM39-206ENST00000420746 SP2Q02086 613 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 PPARAQ07869 468 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 ZNF543Q08ER8 600 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 SMC1AQ14683 1233 aaKnown RBP10.53□□□□□ -0.72
TRIM39-206ENST00000420746 USH1GQ495M9 461 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 IFNL3Q8IZI9 196 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 MAML2Q8IZL2 1156 aaPredicted RBP10.53□□□□□ -0.72
TRIM39-206ENST00000420746 GPCPD1Q9NPB8 672 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 SMG5Q9UPR3 1016 aaKnown RBP10.53□□□□□ -0.72
TRIM39-206ENST00000420746 MTMR7Q9Y216 660 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 FRMPD2Q68DX3 1309 aaPredicted RBP10.53□□□□□ -0.72
TRIM39-206ENST00000420746 CEP295Q9C0D2 2601 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 NOP56O00567 594 aaKnown RBP10.52□□□□□ -0.73
TRIM39-206ENST00000420746 TBC1D4O60343 1298 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 SNHG28P0DPA3 235 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 TOP1P11387 765 aaKnown RBP10.52□□□□□ -0.73
TRIM39-206ENST00000420746 CD52P31358 61 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 GATMP50440 423 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 GHRHRQ02643 423 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 APOBRQ0VD83 1088 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 RARS2Q5T160 578 aaKnown RBP10.52□□□□□ -0.73
TRIM39-206ENST00000420746 METTL7BQ6UX53 244 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 CCDC149Q6ZUS6 474 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 TMC7Q7Z402 723 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 MRPL43Q8N983 215 aaKnown RBP10.52□□□□□ -0.73
TRIM39-206ENST00000420746 ZBTB44Q8NCP5 570 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 TBC1D5Q92609 795 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 NXPE3Q969Y0 559 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 PDCD2LQ9BRP1 358 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 RNF39Q9H2S5 420 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 CDY2AQ9Y6F7 541 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 DENND4AQ7Z401 1863 aa10.52□□□□□ -0.73
TRIM39-206ENST00000420746 ASH1LQ9NR48 2969 aaKnown RBP10.52□□□□□ -0.73
TRIM39-206ENST00000420746 MBLAC1A4D2B0 266 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-206ENST00000420746 C2orf71A6NGG8 1288 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 TBKBP1A7MCY6 615 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 LILRB5O75023 590 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 LRP3O75074 770 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 CLASP2O75122 1294 aaKnown RBP10.51□□□□□ -0.73
TRIM39-206ENST00000420746 DCNP07585 359 aaKnown RBP10.51□□□□□ -0.73
TRIM39-206ENST00000420746 ZFYP08048 801 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-206ENST00000420746 CFHP08603 1231 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 SRFP11831 508 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 MRPS6P82932 125 aaKnown RBP10.51□□□□□ -0.73
TRIM39-206ENST00000420746 KRT17Q04695 432 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 SPECC1Q5M775 1068 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 GPATCH4Q5T3I0 446 aaKnown RBP10.51□□□□□ -0.73
TRIM39-206ENST00000420746 IER5Q5VY09 327 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 VSIG10LQ86VR7 867 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 ATRIPQ8WXE1 791 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 NELL1Q92832 810 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 NAPBQ9H115 298 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 CWH43Q9H720 699 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 TYW1Q9NV66 732 aaKnown RBP10.51□□□□□ -0.73
TRIM39-206ENST00000420746 MAP3K20Q9NYL2 800 aaKnown RBP10.51□□□□□ -0.73
TRIM39-206ENST00000420746 TUBE1Q9UJT0 475 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 GMEB2Q9UKD1 530 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 PADI3Q9ULW8 664 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 MRPL11Q9Y3B7 192 aaKnown RBP10.51□□□□□ -0.73
TRIM39-206ENST00000420746 PCDHB7Q9Y5E2 793 aa10.51□□□□□ -0.73
TRIM39-206ENST00000420746 POTEMA6NI47 508 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 NARSO43776 548 aaKnown RBP10.5□□□□□ -0.73
TRIM39-206ENST00000420746 SORBS3O60504 671 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 WEE2P0C1S8 567 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 HSD17B4P51659 736 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 PAK2Q13177 524 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 NEDD9Q14511 834 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 BMS1Q14692 1282 aaKnown RBP10.5□□□□□ -0.73
TRIM39-206ENST00000420746 POTEGQ6S5H5 508 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 STOX1Q6ZVD7 989 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 GPR149Q86SP6 731 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 SAMD3Q8N6K7 520 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 KBTBD3Q8NAB2 608 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 PJA1Q8NG27 643 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 DNAJB3Q8WWF6 145 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 FRAT1Q92837 279 aaPredicted RBP10.5□□□□□ -0.73
TRIM39-206ENST00000420746 TMEM47Q9BQJ4 181 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 PARD6AQ9NPB6 346 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 ARHGEF3Q9NR81 526 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 C1orf112Q9NSG2 853 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 TCP11L1Q9NUJ3 509 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 ZSCAN32Q9NX65 697 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 IGSF9BQ9UPX0 1349 aa10.5□□□□□ -0.73
TRIM39-206ENST00000420746 FLNBO75369 2602 aaKnown RBP10.5□□□□□ -0.73
TRIM39-206ENST00000420746 M0QZ92 97 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 ANP32CO43423 234 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 LAMTOR5O43504 91 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 ORC4O43929 436 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 RAB11FIP3O75154 756 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 PDE4AP27815 886 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 MAGEA9P43362 315 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 GIT2Q14161 759 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 CDC37Q16543 378 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-206ENST00000420746 ZKSCAN2Q63HK3 967 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 TRIM50Q86XT4 487 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 KDF1Q8NAX2 398 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms