RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 C1orf53Q5VUE5 145 aa20.72■□□□□ 0.91
SEMA3B-202ENST00000418576 TRMT1LQ7Z2T5 733 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-202ENST00000418576 SLC43A3Q8NBI5 491 aa20.72■□□□□ 0.91
SEMA3B-202ENST00000418576 CLIC6Q96NY7 704 aa20.72■□□□□ 0.91
SEMA3B-202ENST00000418576 GRIN2DO15399 1336 aa20.72■□□□□ 0.91
SEMA3B-202ENST00000418576 MROH7Q68CQ1 1323 aa20.72■□□□□ 0.91
SEMA3B-202ENST00000418576 PP2D1A8MPX8 630 aa20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 ZNF862O60290 1169 aa20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 CUTAO60888 179 aa20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 SMIM10L2AP0DMW4 78 aa20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 SMIM10L2BP0DMW5 78 aa20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 GNAT1P11488 350 aa20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 ATP4AP20648 1035 aa20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 TXLNAP40222 546 aa20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 SESTD1Q86VW0 696 aa20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 ZNF579Q8NAF0 562 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 HDAC6Q9UBN7 1215 aa20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 NRCAMQ92823 1304 aa20.71■□□□□ 0.91
SEMA3B-202ENST00000418576 MED24O75448 989 aa20.7■□□□□ 0.9
SEMA3B-202ENST00000418576 LYPLA2O95372 231 aa20.7■□□□□ 0.9
SEMA3B-202ENST00000418576 SPATA31C1P0DKV0 1188 aa20.7■□□□□ 0.9
SEMA3B-202ENST00000418576 PPFIA1Q13136 1202 aa20.7■□□□□ 0.9
SEMA3B-202ENST00000418576 OTUD6AQ7L8S5 288 aa20.7■□□□□ 0.9
SEMA3B-202ENST00000418576 KDM3AQ9Y4C1 1321 aa20.7■□□□□ 0.9
SEMA3B-202ENST00000418576 SCN10AQ9Y5Y9 1956 aa20.7■□□□□ 0.9
SEMA3B-202ENST00000418576 C17orf102A2RUQ5 167 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 RRN3P2A6NIE6 340 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 DDX11L8A8MPP1 907 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 SLC26A4O43511 780 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 YWHABP31946 246 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 CDK7P50613 346 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 SNX17Q15036 470 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 CSPP1Q1MSJ5 1256 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 CABP7Q86V35 215 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 RASSF8Q8NHQ8 419 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 CALML4Q96GE6 196 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 CDK5RAP3Q96JB5 506 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 NACC1Q96RE7 527 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 HTATIP2Q9BUP3 242 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 NT5C3AQ9H0P0 336 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 GTF2IRD1Q9UHL9 959 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 PCDHA7Q9UN72 937 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 INSRRP14616 1297 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 ZRSR1Q15695 479 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 SPECC1Q5M775 1068 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 KCTD17Q8N5Z5 321 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 MMTAG2Q9BU76 263 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 SETD4Q9NVD3 440 aa20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 WRAP73Q9P2S5 460 aaPredicted RBP20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 SEPT9Q9UHD8 586 aaPredicted RBP20.69■□□□□ 0.9
SEMA3B-202ENST00000418576 XRCC6P12956 609 aaKnown RBP eCLIP20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 GRIK4Q16099 956 aa20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 ZNF484Q5JVG2 852 aa20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 PPP1R13LQ8WUF5 828 aa20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 SYMPKQ92797 1274 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 CCDC43Q96MW1 224 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 NIFKQ9BYG3 293 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 CCSER1Q9C0I3 900 aa20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 GDPD2Q9HCC8 539 aa20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 CCDC39Q9UFE4 941 aa20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 KIAA1024Q9UPX6 916 aa20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 NOD1Q9Y239 953 aa20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 MYH9P35579 1960 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-202ENST00000418576 COL1A2P08123 1366 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 DCDC2CA8MYV0 355 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 TLR3O15455 904 aaKnown RBP20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 PQBP1O60828 265 aaKnown RBP20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 POTEGQ6S5H5 508 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 ANO5Q75V66 913 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 ANKRD33Q7Z3H0 272 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 EPSTI1Q96J88 318 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 TOX2Q96NM4 488 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 IGBP1P78318 339 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 LRRC26Q2I0M4 334 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 TRIM60Q495X7 471 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 HYIQ5T013 277 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 AXDND1Q5T1B0 1012 aaPredicted RBP20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 ADALQ6DHV7 355 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 LMBR1Q8WVP7 490 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 ANKEF1Q9NU02 776 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 DDX19AQ9NUU7 478 aaKnown RBP20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 DNM3Q9UQ16 869 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 ATP11BQ9Y2G3 1177 aa20.67■□□□□ 0.9
SEMA3B-202ENST00000418576 STBD1O95210 358 aa20.66■□□□□ 0.9
SEMA3B-202ENST00000418576 RTP1P59025 263 aa20.66■□□□□ 0.9
SEMA3B-202ENST00000418576 PTGISQ16647 500 aa20.66■□□□□ 0.9
SEMA3B-202ENST00000418576 GDF6Q6KF10 455 aaPredicted RBP20.66■□□□□ 0.9
SEMA3B-202ENST00000418576 CEP170P1Q96L14 293 aa20.66■□□□□ 0.9
SEMA3B-202ENST00000418576 FAM13BQ9NYF5 915 aa20.66■□□□□ 0.9
SEMA3B-202ENST00000418576 PPME1Q9Y570 386 aa20.66■□□□□ 0.9
SEMA3B-202ENST00000418576 GOLGA6L4A6NEF3 574 aa20.65■□□□□ 0.9
SEMA3B-202ENST00000418576 HOXC8P31273 242 aa20.65■□□□□ 0.9
SEMA3B-202ENST00000418576 ECM1Q16610 540 aa20.65■□□□□ 0.9
SEMA3B-202ENST00000418576 USP49Q70CQ1 688 aa20.65■□□□□ 0.9
SEMA3B-202ENST00000418576 FAM126BQ8IXS8 530 aa20.65■□□□□ 0.9
SEMA3B-202ENST00000418576 EXOC8Q8IYI6 725 aa20.65■□□□□ 0.9
SEMA3B-202ENST00000418576 PIGOQ8TEQ8 1089 aa20.65■□□□□ 0.9
SEMA3B-202ENST00000418576 CYP26B1Q9NR63 512 aa20.65■□□□□ 0.9
SEMA3B-202ENST00000418576 TRMT13Q9NUP7 481 aaKnown RBP20.65■□□□□ 0.9
SEMA3B-202ENST00000418576 TUBE1Q9UJT0 475 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms