RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 FAM26FQ5R3K3 315 aa23.08■■□□□ 1.29
CASC3-203ENST00000418132 METTL7BQ6UX53 244 aa23.08■■□□□ 1.29
CASC3-203ENST00000418132 PAXIP1Q6ZW49 1069 aaPredicted RBP23.08■■□□□ 1.29
CASC3-203ENST00000418132 TRIM5Q9C035 493 aa23.08■■□□□ 1.29
CASC3-203ENST00000418132 ANKEF1Q9NU02 776 aa23.08■■□□□ 1.29
CASC3-203ENST00000418132 SORBS3O60504 671 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 GGPS1O95749 300 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 HERC4Q5GLZ8 1057 aaPredicted RBP23.07■■□□□ 1.28
CASC3-203ENST00000418132 MORN1Q5T089 497 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 SWSAP1Q6NVH7 229 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 CCDC60Q8IWA6 550 aaPredicted RBP23.07■■□□□ 1.28
CASC3-203ENST00000418132 GUF1Q8N442 669 aaKnown RBP23.07■■□□□ 1.28
CASC3-203ENST00000418132 MAML3Q96JK9 1138 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 VTA1Q9NP79 307 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 IGKV6D-21A0A0A0MT36 114 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 CA12O43570 354 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 ZNF862O60290 1169 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 GUCY2CP25092 1073 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 ZNF75DP51815 510 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 NOGQ13253 232 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 SCFD2Q8WU76 684 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 IGSF9BQ9UPX0 1349 aa23.07■■□□□ 1.28
CASC3-203ENST00000418132 RASSF10A6NK89 507 aa23.06■■□□□ 1.28
CASC3-203ENST00000418132 ATP1A3P13637 1013 aa23.06■■□□□ 1.28
CASC3-203ENST00000418132 GRM1Q13255 1194 aa23.06■■□□□ 1.28
CASC3-203ENST00000418132 SLC5A4Q9NY91 659 aa23.06■■□□□ 1.28
CASC3-203ENST00000418132 COL4A3BPQ9Y5P4 624 aa23.06■■□□□ 1.28
CASC3-203ENST00000418132 GSTTP1A0A1W2PQM5 241 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 STBD1O95210 358 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 CCNE1P24864 410 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 CELF3Q5SZQ8 465 aaKnown RBP23.05■■□□□ 1.28
CASC3-203ENST00000418132 TAPT1Q6NXT6 567 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 PADI6Q6TGC4 694 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 KATNBL1Q9H079 304 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 CREBZFQ9NS37 354 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 SAMSN1Q9NSI8 373 aaKnown RBP23.05■■□□□ 1.28
CASC3-203ENST00000418132 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.05■■□□□ 1.28
CASC3-203ENST00000418132 ODF2LQ9ULJ1 636 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 RBM47A0AV96 593 aaKnown RBP23.05■■□□□ 1.28
CASC3-203ENST00000418132 RSPH10B2B2RC85 870 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 TBCAO75347 108 aaKnown RBP23.05■■□□□ 1.28
CASC3-203ENST00000418132 RSPH10BP0C881 870 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 TTLL4Q14679 1199 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 DEFB115Q30KQ5 88 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 CDKAL1Q5VV42 579 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 ANO5Q75V66 913 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 DOCK3Q8IZD9 2030 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 MSL3Q8N5Y2 521 aaKnown RBP23.05■■□□□ 1.28
CASC3-203ENST00000418132 ZNF784Q8NCA9 323 aaPredicted RBP23.05■■□□□ 1.28
CASC3-203ENST00000418132 NPLOC4Q8TAT6 608 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 P2RX5Q93086 422 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 MLXIPQ9HAP2 919 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 PDGFCQ9NRA1 345 aa23.05■■□□□ 1.28
CASC3-203ENST00000418132 MAFBQ9Y5Q3 323 aaPredicted RBP23.05■■□□□ 1.28
CASC3-203ENST00000418132 SNAI1O95863 264 aaPredicted RBP23.04■■□□□ 1.28
CASC3-203ENST00000418132 ALDH1A1P00352 501 aa23.04■■□□□ 1.28
CASC3-203ENST00000418132 TXNP10599 105 aaKnown RBP23.04■■□□□ 1.28
CASC3-203ENST00000418132 GAP43P17677 238 aa23.04■■□□□ 1.28
CASC3-203ENST00000418132 ZNF131P52739 623 aa23.04■■□□□ 1.28
CASC3-203ENST00000418132 PMS1P54277 932 aaKnown RBP23.04■■□□□ 1.28
CASC3-203ENST00000418132 MAP2K5Q13163 448 aa23.04■■□□□ 1.28
CASC3-203ENST00000418132 CENPPQ6IPU0 288 aa23.04■■□□□ 1.28
CASC3-203ENST00000418132 TTI2Q6NXR4 508 aa23.04■■□□□ 1.28
CASC3-203ENST00000418132 SFR1Q86XK3 245 aa23.04■■□□□ 1.28
CASC3-203ENST00000418132 GLIS3Q8NEA6 775 aa23.04■■□□□ 1.28
CASC3-203ENST00000418132 MRFAP1L1Q96HT8 127 aa23.04■■□□□ 1.28
CASC3-203ENST00000418132 ZHX3Q9H4I2 956 aa23.04■■□□□ 1.28
CASC3-203ENST00000418132 MYH9P35579 1960 aaKnown RBP23.04■■□□□ 1.28
CASC3-203ENST00000418132 BICDL2A1A5D9 508 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 BACH1O14867 736 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 HOXC6P09630 235 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 FANCCQ00597 558 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 UTP14CQ5TAP6 766 aaKnown RBP23.03■■□□□ 1.28
CASC3-203ENST00000418132 OTUD6AQ7L8S5 288 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 SEPT1Q8WYJ6 367 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 USP6NLQ92738 828 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 TINF2Q9BSI4 451 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 ZNF302Q9NR11 478 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 OLFML3Q9NRN5 406 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.03■■□□□ 1.28
CASC3-203ENST00000418132 TMEM150BA6NC51 233 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 TRIM49BA6NDI0 452 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 PTMAP06454 111 aaKnown RBP23.03■■□□□ 1.28
CASC3-203ENST00000418132 MSNP26038 577 aaKnown RBP23.03■■□□□ 1.28
CASC3-203ENST00000418132 PRKCEQ02156 737 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 MYOCDQ8IZQ8 938 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 CAPNS2Q96L46 248 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 FGFBP2Q9BYJ0 223 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 TBC1D7Q9P0N9 293 aa23.03■■□□□ 1.28
CASC3-203ENST00000418132 FAM13AO94988 1023 aa23.02■■□□□ 1.28
CASC3-203ENST00000418132 APLP1P51693 650 aa23.02■■□□□ 1.28
CASC3-203ENST00000418132 MAPK7Q13164 816 aa23.02■■□□□ 1.28
CASC3-203ENST00000418132 LRRC41Q15345 812 aa23.02■■□□□ 1.28
CASC3-203ENST00000418132 TPD52L1Q16890 204 aaPredicted RBP23.02■■□□□ 1.28
CASC3-203ENST00000418132 XKR9Q5GH70 373 aa23.02■■□□□ 1.28
CASC3-203ENST00000418132 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.02■■□□□ 1.28
CASC3-203ENST00000418132 DHX37Q8IY37 1157 aaKnown RBP23.02■■□□□ 1.28
CASC3-203ENST00000418132 REM2Q8IYK8 340 aaPredicted RBP23.02■■□□□ 1.28
CASC3-203ENST00000418132 CCDC43Q96MW1 224 aaKnown RBP23.02■■□□□ 1.28
CASC3-203ENST00000418132 PCYT2Q99447 389 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms