RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 KLRC3Q07444 240 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 MYO1EQ12965 1108 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 COASYQ13057 564 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 NAA25Q14CX7 972 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 ZKSCAN8Q15776 578 aaPredicted RBP8.57□□□□□ -1.04
VRK2-203ENST00000417641 IFI16Q16666 785 aaKnown RBP8.57□□□□□ -1.04
VRK2-203ENST00000417641 CCDC152Q4G0S7 254 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 ZDHHC24Q6UX98 284 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 TRPM8Q7Z2W7 1104 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 NT5DC3Q86UY8 548 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 CCDC26Q8TAB7 109 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 TBC1D31Q96DN5 1066 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 FAM84BQ96KN1 310 aaPredicted RBP8.57□□□□□ -1.04
VRK2-203ENST00000417641 TMEM109Q9BVC6 243 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 CELF4Q9BZC1 486 aaKnown RBP8.57□□□□□ -1.04
VRK2-203ENST00000417641 SLC24A3Q9HC58 644 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 SLC5A4Q9NY91 659 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 L3MBTL1Q9Y468 752 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 SCN7AQ01118 1682 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 DDX3YO15523 660 aaKnown RBP8.57□□□□□ -1.04
VRK2-203ENST00000417641 GNA14O95837 355 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 MMEP08473 750 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 NQO1P15559 274 aaKnown RBP8.57□□□□□ -1.04
VRK2-203ENST00000417641 ANXA13P27216 316 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 MECOMQ03112 1051 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 UBE4AQ14139 1066 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 SLMAPQ14BN4 828 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 ECM1Q16610 540 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 COL23A1Q86Y22 540 aaPredicted RBP8.57□□□□□ -1.04
VRK2-203ENST00000417641 DNAAF5Q86Y56 855 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 ZNF483Q8TF39 744 aaPredicted RBP8.57□□□□□ -1.04
VRK2-203ENST00000417641 LMBR1Q8WVP7 490 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 THOC1Q96FV9 657 aaKnown RBP8.57□□□□□ -1.04
VRK2-203ENST00000417641 SPZ1Q9BXG8 430 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 CRNKL1Q9BZJ0 848 aaKnown RBP8.57□□□□□ -1.04
VRK2-203ENST00000417641 KCTD10Q9H3F6 313 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 MYH7BA7E2Y1 1941 aa8.57□□□□□ -1.04
VRK2-203ENST00000417641 TRAF5O00463 557 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 BUB1BO60566 1050 aaPredicted RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 SMNDC1O75940 238 aaKnown RBP eCLIP8.56□□□□□ -1.04
VRK2-203ENST00000417641 NTSR2O95665 410 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 TXKP42681 527 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 CCNG1P51959 295 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 KCNJ2P63252 427 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 ICA1Q05084 483 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 PDIA5Q14554 519 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 C12orf60Q5U649 245 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 FBXO33Q7Z6M2 555 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 TBC1D1Q86TI0 1168 aaPredicted RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 HOOK3Q86VS8 718 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 RBM46Q8TBY0 533 aaKnown RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 TBCKQ8TEA7 893 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 TCP11Q8WWU5 503 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 LZTS2Q9BRK4 669 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 TRIM51Q9BSJ1 452 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 DPH5Q9H2P9 285 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 PABPC3Q9H361 631 aaKnown RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 KANSL2Q9H9L4 492 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 ABCF3Q9NUQ8 709 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 INTUQ9ULD6 942 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 BZW2Q9Y6E2 419 aaKnown RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 ROBO3Q96MS0 1386 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 ESYT2A0FGR8 921 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 ANKRD33BA6NCL7 494 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 SMCO2A6NFE2 343 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 LIN7AO14910 233 aaPredicted RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 SNX3O60493 162 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 SKAP2O75563 359 aaPredicted RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 UBOX5O94941 541 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 USP17L8P0C7I0 530 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 ALDH5A1P51649 535 aaPredicted RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 DRG2P55039 364 aaKnown RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 PTENP60484 403 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 IFI35P80217 286 aaPredicted RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 ARID5AQ03989 594 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 PPATQ06203 517 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 SEPT2Q15019 361 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 DCAF12L1Q5VU92 463 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 MIS18BP1Q6P0N0 1132 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 ALKBH5Q6P6C2 394 aaKnown RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 ANKS4BQ8N8V4 417 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 SPAG5Q96R06 1193 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 FMO2Q99518 471 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 ELAC2Q9BQ52 826 aaKnown RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 TMEM47Q9BQJ4 181 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 LRRC27Q9C0I9 530 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 CNOT7Q9UIV1 285 aaKnown RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 ATP8A1Q9Y2Q0 1164 aa8.56□□□□□ -1.04
VRK2-203ENST00000417641 UTP11Q9Y3A2 253 aaKnown RBP8.56□□□□□ -1.04
VRK2-203ENST00000417641 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.56□□□□□ -1.04
VRK2-203ENST00000417641 BCL9O00512 1426 aa8.55□□□□□ -1.04
VRK2-203ENST00000417641 USP17L3A6NCW0 530 aa8.55□□□□□ -1.04
VRK2-203ENST00000417641 USP17L4A6NCW7 530 aa8.55□□□□□ -1.04
VRK2-203ENST00000417641 A6NHS1 94 aa8.55□□□□□ -1.04
VRK2-203ENST00000417641 DDX3XO00571 662 aaKnown RBP eCLIP8.55□□□□□ -1.042e-11■□□□□ 11.2
VRK2-203ENST00000417641 SLC37A4O43826 429 aa8.55□□□□□ -1.04
VRK2-203ENST00000417641 CLTAP09496 248 aa8.55□□□□□ -1.04
VRK2-203ENST00000417641 ATXN8OSP0DMR3 200 aa8.55□□□□□ -1.04
VRK2-203ENST00000417641 ACTN1P12814 892 aa8.55□□□□□ -1.04
VRK2-203ENST00000417641 PMS2P54278 862 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms