RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 RUFY4Q6ZNE9 571 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 CATIPQ7Z7H3 387 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 RALYLQ86SE5 291 aaKnown RBP8.34□□□□□ -1.07
CASP4-202ENST00000417440 ALYREFQ86V81 257 aaKnown RBP8.34□□□□□ -1.07
CASP4-202ENST00000417440 RETREG3Q86VR2 466 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 FIBCD1Q8N539 461 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 EXOC6Q8TAG9 804 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 CUL5Q93034 780 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 THAP11Q96EK4 314 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 IL17RAQ96F46 866 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 SAMD11Q96NU1 681 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 MYL10Q9BUA6 226 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 USP26Q9BXU7 913 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 NSUN3Q9H649 340 aaKnown RBP8.34□□□□□ -1.07
CASP4-202ENST00000417440 RIOX1Q9H6W3 641 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 PKD2L1Q9P0L9 805 aa8.34□□□□□ -1.07
CASP4-202ENST00000417440 ZNF215Q9UL58 517 aaPredicted RBP8.34□□□□□ -1.07
CASP4-202ENST00000417440 COL4A4P53420 1690 aaPredicted RBP8.34□□□□□ -1.08
CASP4-202ENST00000417440 BDP1A6H8Y1 2624 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 PRR33A8MZF0 331 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 GRM6O15303 877 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 CHRNA1P02708 482 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 CYP21A2P08686 494 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 ICAM3P32942 547 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 IGBP1P78318 339 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 PTH1RQ03431 593 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 MCM6Q14566 821 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 SART3Q15020 963 aaKnown RBP8.33□□□□□ -1.08
CASP4-202ENST00000417440 RPAINQ86UA6 219 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 NLRX1Q86UT6 975 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 SAMD3Q8N6K7 520 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 NEK9Q8TD19 979 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 LMBR1Q8WVP7 490 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 APBB2Q92870 758 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 ZBTB10Q96DT7 871 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 PABPC5Q96DU9 382 aaKnown RBP8.33□□□□□ -1.08
CASP4-202ENST00000417440 TAF6LQ9Y6J9 622 aa8.33□□□□□ -1.08
CASP4-202ENST00000417440 TRIP12Q14669 1992 aaPredicted RBP8.33□□□□□ -1.08
CASP4-202ENST00000417440 CFAP99D6REC4 459 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 E7EWF7 191 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 DCXO43602 365 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 ATP9AO75110 1047 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 CAND2O75155 1236 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 STAM2O75886 525 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 HOXC8P31273 242 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 GTF2F1P35269 517 aaKnown RBP eCLIP8.32□□□□□ -1.08
CASP4-202ENST00000417440 TCF7P36402 384 aaPredicted RBP8.32□□□□□ -1.08
CASP4-202ENST00000417440 PPFIA1Q13136 1202 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 BTG3Q14201 252 aaPredicted RBP8.32□□□□□ -1.08
CASP4-202ENST00000417440 NFXL1Q6ZNB6 911 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 RAB11FIP4Q86YS3 637 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 CMTR1Q8N1G2 835 aaKnown RBP8.32□□□□□ -1.08
CASP4-202ENST00000417440 CCDC82Q8N4S0 544 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 NCOA7Q8NI08 942 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 DNAJB3Q8WWF6 145 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 GLG1Q92896 1179 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 RRP36Q96EU6 259 aaKnown RBP8.32□□□□□ -1.08
CASP4-202ENST00000417440 INPP4AQ96PE3 977 aaPredicted RBP8.32□□□□□ -1.08
CASP4-202ENST00000417440 FAM49AQ9H0Q0 323 aaPredicted RBP8.32□□□□□ -1.08
CASP4-202ENST00000417440 ALG13Q9NP73 1137 aaKnown RBP8.32□□□□□ -1.08
CASP4-202ENST00000417440 SEC63Q9UGP8 760 aaKnown RBP8.32□□□□□ -1.08
CASP4-202ENST00000417440 FAM50BQ9Y247 325 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 PTPRSQ13332 1948 aa8.32□□□□□ -1.08
CASP4-202ENST00000417440 NRCAMQ92823 1304 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 hCG_1642624A0A1W2PR95 340 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 ENPP3O14638 875 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 LINC01565O15544 149 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 AP1G2O75843 785 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 GSPT1P15170 499 aaKnown RBP8.31□□□□□ -1.08
CASP4-202ENST00000417440 RXRAP19793 462 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 BMPR1AP36894 532 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 ADAM17P78536 824 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 ZP2Q05996 745 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 DLX2Q07687 328 aaPredicted RBP8.31□□□□□ -1.08
CASP4-202ENST00000417440 TMEM62Q0P6H9 643 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 HYAL1Q12794 435 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 TROAPQ12815 778 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 LPIN1Q14693 890 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 GRIK4Q16099 956 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 UBE2SQ16763 222 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 PAN2Q504Q3 1202 aaKnown RBP8.31□□□□□ -1.08
CASP4-202ENST00000417440 FAM26DQ5JW98 314 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 PCNX4Q63HM2 1172 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 DESI1Q6ICB0 168 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 RNF19BQ6ZMZ0 732 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 RSPH3Q86UC2 560 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 CTCFLQ8NI51 663 aaPredicted RBP8.31□□□□□ -1.08
CASP4-202ENST00000417440 PRR7Q8TB68 274 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 RUFY2Q8WXA3 655 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 SEPT1Q8WYJ6 367 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 USB1Q9BQ65 265 aaKnown RBP8.31□□□□□ -1.08
CASP4-202ENST00000417440 C11orf84Q9BUA3 381 aaPredicted RBP8.31□□□□□ -1.08
CASP4-202ENST00000417440 HCSTQ9UBK5 93 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 CDY2AQ9Y6F7 541 aa8.31□□□□□ -1.08
CASP4-202ENST00000417440 ADGRA3Q8IWK6 1321 aa8.3□□□□□ -1.08
CASP4-202ENST00000417440 GSTTP1A0A1W2PQM5 241 aa8.3□□□□□ -1.08
CASP4-202ENST00000417440 MEIS2O14770 477 aa8.3□□□□□ -1.08
CASP4-202ENST00000417440 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
CASP4-202ENST00000417440 PLEKHA8P1O95397 391 aa8.3□□□□□ -1.08
CASP4-202ENST00000417440 ITGB5P18084 799 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms