RNA–Protein interactions for RNA: ENST00000417243.5

TRAPPC12-206, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 1,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-206ENST00000417243 CTTNQ14247 550 aaKnown RBP14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 LRRC41Q15345 812 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 XKR3Q5GH77 459 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 TRIM50Q86XT4 487 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 IQUBQ8NA54 791 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 PCSK9Q8NBP7 692 aaKnown RBP14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 TIGD1Q96MW7 591 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 NACC1Q96RE7 527 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 KATNAL1Q9BW62 490 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 CRISPLD2Q9H0B8 497 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 RNF208Q9H0X6 261 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 BLOC1S4Q9NUP1 217 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 DDX19AQ9NUU7 478 aaKnown RBP14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 ERAP1Q9NZ08 941 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 DBR1Q9UK59 544 aaKnown RBP14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 OGDHLQ9ULD0 1010 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 KIAA1024Q9UPX6 916 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 PPME1Q9Y570 386 aa14.03□□□□□ -0.16
TRAPPC12-206ENST00000417243 KAT6AQ92794 2004 aa14.02□□□□□ -0.16
TRAPPC12-206ENST00000417243 MOXD2PA6NHM9 499 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 HAS3O00219 553 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 ACTN4O43707 911 aaKnown RBP14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 OATP04181 439 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 GJB1P08034 283 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 ZNF286BP0CG31 522 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 LIG1P18858 919 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 ATP4AP20648 1035 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 STAT6P42226 847 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 BEX3Q00994 111 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 NFKBIBQ15653 356 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 GNASQ5JWF2 1037 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 RRAGBQ5VZM2 374 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 KCNK18Q7Z418 384 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 TPH2Q8IWU9 490 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 ARRDC4Q8NCT1 418 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 RASSF8Q8NHQ8 419 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 ATP8B4Q8TF62 1192 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 LRRC15Q8TF66 581 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 BBXQ8WY36 941 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 LARP4BQ92615 738 aaKnown RBP14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 KAT2BQ92831 832 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 GLG1Q92896 1179 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 ANKEF1Q9NU02 776 aa14.02□□□□□ -0.17
TRAPPC12-206ENST00000417243 COL1A2P08123 1366 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 H3BRB1 525 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 DNM1LO00429 736 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 POLR2DO15514 142 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 NR1I2O75469 434 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 CABYRO75952 493 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 ZNF202O95125 648 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 EYA4O95677 639 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 YWHABP31946 246 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 IRX5P78411 483 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 PLCB4Q15147 1175 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 UTP14CQ5TAP6 766 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 ANO5Q75V66 913 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 ELOA2Q8IYF1 753 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 PDILTQ8N807 584 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 GPT2Q8TD30 523 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 RAD54LQ92698 747 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 DEFB118Q96PH6 123 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 MTG1Q9BT17 334 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 NIFKQ9BYG3 293 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 TUT1Q9H6E5 874 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 DNM3Q9UQ16 869 aa14.01□□□□□ -0.17
TRAPPC12-206ENST00000417243 KIAA0100Q14667 2235 aaKnown RBP14□□□□□ -0.17
TRAPPC12-206ENST00000417243 E9PMD0 336 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 HBP1O60381 514 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 SGPL1O95470 568 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 ASGR1P07306 291 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 MYL3P08590 195 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 SLFN14P0C7P3 912 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 HOXC8P31273 242 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 RARRES1P49788 294 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 PSMC6P62333 389 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 TARBP2Q15633 366 aaKnown RBP14□□□□□ -0.17
TRAPPC12-206ENST00000417243 KCNA10Q16322 511 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 KRBA2Q6ZNG9 492 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 ANKLE1Q8NAG6 615 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 U2AF1L4Q8WU68 220 aaKnown RBP14□□□□□ -0.17
TRAPPC12-206ENST00000417243 DHX58Q96C10 678 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 TNMDQ9H2S6 317 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 KBTBD4Q9NVX7 518 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 KCND2Q9NZV8 630 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 PHF24Q9UPV7 400 aa14□□□□□ -0.17
TRAPPC12-206ENST00000417243 KBTBD13C9JR72 458 aa13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 KINO60870 393 aaKnown RBP13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 MYL1P05976 194 aa13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 GJA8P48165 433 aa13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 PSEN2P49810 448 aa13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 SLC12A3P55017 1021 aa13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 MFSD10Q14728 455 aa13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 ZRSR1Q15695 479 aaKnown RBP13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 KLHL40Q2TBA0 621 aa13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 KANK3Q6NY19 840 aa13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 CNNM4Q6P4Q7 775 aa13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 SH3RF1Q7Z6J0 888 aa13.99□□□□□ -0.17
TRAPPC12-206ENST00000417243 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms