RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 PLXNA4Q9HCM2 1894 aa11.49□□□□□ -0.57
MDC1-202ENST00000416571 C5orf42Q9H799 3197 aa11.49□□□□□ -0.57
MDC1-202ENST00000416571 FSD2A1L4K1 749 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 TMEM221A6NGB7 291 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 CCDC69A6NI79 296 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 M0R296 226 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 PPFIA3O75145 1194 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 ITGB5P18084 799 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 DNAJB1P25685 340 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 COASYQ13057 564 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 TTC22Q5TAA0 569 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 BMP8AQ7Z5Y6 402 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 ADGRD2Q7Z7M1 963 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 SMRP1Q8NCR6 262 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 IGDCC4Q8TDY8 1250 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 ZBTB10Q96DT7 871 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 SDF4Q9BRK5 362 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 TLE6Q9H808 572 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 JADE2Q9NQC1 790 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 RNF216Q9NWF9 866 aaPredicted RBP11.48□□□□□ -0.57
MDC1-202ENST00000416571 CLEC1BQ9P126 229 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 SLC9A2Q9UBY0 812 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 BARX2Q9UMQ3 279 aaPredicted RBP11.48□□□□□ -0.57
MDC1-202ENST00000416571 PCDHB12Q9Y5F1 795 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 UBIAD1Q9Y5Z9 338 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 IGSF9BQ9UPX0 1349 aa11.48□□□□□ -0.57
MDC1-202ENST00000416571 TECTAO75443 2155 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 PLEKHA8P1O95397 391 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 SRGAP2BP0DMP2 458 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 ANTXR2P58335 489 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 ZXDAP98168 799 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 KRT76Q01546 638 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 NFX1Q12986 1120 aaKnown RBP11.47□□□□□ -0.57
MDC1-202ENST00000416571 UBE2SQ16763 222 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 RTN4RL1Q86UN2 441 aaPredicted RBP11.47□□□□□ -0.57
MDC1-202ENST00000416571 MB21D2Q8IYB1 491 aaPredicted RBP11.47□□□□□ -0.57
MDC1-202ENST00000416571 TMTC2Q8N394 836 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 RPGRIP1Q96KN7 1286 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 PHF7Q9BWX1 381 aaPredicted RBP11.47□□□□□ -0.57
MDC1-202ENST00000416571 CELF4Q9BZC1 486 aaKnown RBP11.47□□□□□ -0.57
MDC1-202ENST00000416571 LY9Q9HBG7 655 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 PCDHA6Q9UN73 950 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 GINS2Q9Y248 185 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 USP15Q9Y4E8 981 aaPredicted RBP11.47□□□□□ -0.57
MDC1-202ENST00000416571 PCDHB7Q9Y5E2 793 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 PCDHA8Q9Y5H6 950 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 PCDHA2Q9Y5H9 948 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 TAF6LQ9Y6J9 622 aa11.47□□□□□ -0.57
MDC1-202ENST00000416571 SMIM35A0A1B0GVV1 85 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 DENND3A2RUS2 1198 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 LOC730098B7Z3J9 87 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 PRC1O43663 620 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 CALM1P0DP23 149 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 CALM2P0DP24 149 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 CALM3P0DP25 149 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 GSPT1P15170 499 aaKnown RBP11.46□□□□□ -0.57
MDC1-202ENST00000416571 CHMLP26374 656 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 SARSP49591 514 aaKnown RBP11.46□□□□□ -0.57
MDC1-202ENST00000416571 GATMP50440 423 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 STAT5BP51692 787 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 UBE3AQ05086 875 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 PLCB4Q15147 1175 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 TMEM266Q2M3C6 531 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 ODR4Q5SWX8 454 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 HEATR3Q7Z4Q2 680 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 CMTR1Q8N1G2 835 aaKnown RBP11.46□□□□□ -0.57
MDC1-202ENST00000416571 CRIPAKQ8N1N5 446 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 NME8Q8N427 588 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 FBXL6Q8N531 539 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 SRBD1Q8N5C6 995 aaKnown RBP11.46□□□□□ -0.57
MDC1-202ENST00000416571 PRSS33Q8NF86 280 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 TRAPPC12Q8WVT3 735 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 NEK1Q96PY6 1258 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 PCYT2Q99447 389 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 MTA3Q9BTC8 594 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 TLR9Q9NR96 1032 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 KCNH7Q9NS40 1196 aa11.46□□□□□ -0.57
MDC1-202ENST00000416571 FNDC1Q4ZHG4 1894 aaPredicted RBP11.45□□□□□ -0.58
MDC1-202ENST00000416571 KDM3AQ9Y4C1 1321 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 hCG_1642624A0A1W2PR95 340 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 TBKBP1A7MCY6 615 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 BACH1O14867 736 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 PER2O15055 1255 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 ST18O60284 1047 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 RPS6KA5O75582 802 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 GLP2RO95838 553 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 RXRAP19793 462 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 MCM5P33992 734 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 ACTR2P61160 394 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 SIGLEC14Q08ET2 396 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 CBX2Q14781 532 aaPredicted RBP11.45□□□□□ -0.58
MDC1-202ENST00000416571 FAM43BQ6ZT52 329 aaPredicted RBP11.45□□□□□ -0.58
MDC1-202ENST00000416571 PLPPR4Q7Z2D5 763 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 ZBTB33Q86T24 672 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 THNSL1Q8IYQ7 743 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 CCDC82Q8N4S0 544 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 EXOC6Q8TAG9 804 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 COL26A1Q96A83 441 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 TMEM87BQ96K49 555 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms