RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 CELF3Q5SZQ8 465 aaKnown RBP9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 CREB3L3Q68CJ9 461 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 RPAINQ86UA6 219 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 TMEM192Q8IY95 271 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 STAG2Q8N3U4 1231 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 NCOA7Q8NI08 942 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 SEPT8Q92599 483 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 ANKS1AQ92625 1134 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 ATP6V0A1Q93050 837 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 PABPC5Q96DU9 382 aaKnown RBP9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 NSUN3Q9H649 340 aaKnown RBP9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 VAT1LQ9HCJ6 419 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 NOVA2Q9UNW9 492 aaKnown RBP9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 TAF6LQ9Y6J9 622 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 WDFY4Q6ZS81 3184 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 ZDBF2Q9HCK1 2354 aa9.52□□□□□ -0.88
UPF3AP1-201ENST00000413731 H3BNC9 293 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 SLC27A2O14975 620 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 TREHO43280 583 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 LINC00271P0C7V0 271 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 HOXB1P14653 301 aaPredicted RBP9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 CTNNB1P35222 781 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 CLUL1Q15846 466 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 PUS10Q3MIT2 529 aaKnown RBP9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 IFIT1BQ5T764 474 aaKnown RBP9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 STOX1Q6ZVD7 989 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 TRIM50Q86XT4 487 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 TOP1MTQ969P6 601 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 FBXL18Q96ME1 805 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 SAMD11Q96NU1 681 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 AMNQ9BXJ7 453 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 IFIH1Q9BYX4 1025 aaKnown RBP9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 BCAS3Q9H6U6 928 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 CLDND1Q9NY35 253 aa9.52□□□□□ -0.89
UPF3AP1-201ENST00000413731 POTEB3A0JP26 581 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 H3BRB1 525 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 PIK3CDO00329 1044 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 IFIT3O14879 490 aaKnown RBP9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 SNPHO15079 494 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 PPFIA4O75335 1185 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 LTBRP36941 435 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 ELOAQ14241 798 aaKnown RBP9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 SLC35G1Q2M3R5 365 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 TMEM164Q5U3C3 297 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 POTEBQ6S5H4 581 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 HFE2Q6ZVN8 426 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 CYB5R4Q7L1T6 521 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 ADHFE1Q8IWW8 467 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 STK32AQ8WU08 396 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 MTMR8Q96EF0 704 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 TUT1Q9H6E5 874 aaKnown RBP9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 ZSWIM5Q9P217 1185 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 TELO2Q9Y4R8 837 aa9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 FNDC1Q4ZHG4 1894 aaPredicted RBP9.51□□□□□ -0.89
UPF3AP1-201ENST00000413731 ZBTB5O15062 677 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 GRM6O15303 877 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 PRC1O43663 620 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 CAND2O75155 1236 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 TBX10O75333 385 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 CCND2P30279 289 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 MCM5P33992 734 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 GTF2F1P35269 517 aaKnown RBP eCLIP9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 IRS1P35568 1242 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 DLX2Q07687 328 aaPredicted RBP9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 HYAL1Q12794 435 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 WTAPQ15007 396 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 DESI1Q6ICB0 168 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 KCNV1Q6PIU1 500 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 VSIG10LQ86VR7 867 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 FCHSD1Q86WN1 690 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 HOMER1Q86YM7 354 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 MB21D2Q8IYB1 491 aaPredicted RBP9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 LMBR1Q8WVP7 490 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 RNPEPQ9H4A4 650 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 MLXIPQ9HAP2 919 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 RC3H2Q9HBD1 1191 aaKnown RBP9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 SETD4Q9NVD3 440 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 PRKAG3Q9UGI9 489 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 MUTYHQ9UIF7 546 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 PCDHA1Q9Y5I3 950 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 FRMPD4Q14CM0 1322 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 ADGRA3Q8IWK6 1321 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 TRIOO75962 3097 aa9.5□□□□□ -0.89
UPF3AP1-201ENST00000413731 KLRF2D3W0D1 207 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 C5orf67F2Z3F1 127 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 NOP56O00567 594 aaKnown RBP9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 MBTPS2O43462 519 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 GHRP10912 638 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 ANTXR2P58335 489 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 ARHGAP4P98171 946 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 KRT32Q14532 448 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 NECTIN1Q15223 517 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 CTC1Q2NKJ3 1217 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 LYPD8Q6UX82 237 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 NFXL1Q6ZNB6 911 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 APBB2Q92870 758 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 MAD2L2Q9UI95 211 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 ZMIZ1Q9ULJ6 1067 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 FAM50BQ9Y247 325 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms