RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 CFAP74Q9C0B2 1584 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 C21orf2O43822 256 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 LIG3P49916 1009 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 KRT33BQ14525 404 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.76■□□□□ 0.75
HCG11-201ENST00000411553 CLEC4GQ6UXB4 293 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 SLITRK6Q9H5Y7 841 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 OLA1Q9NTK5 396 aaKnown RBP19.76■□□□□ 0.75
HCG11-201ENST00000411553 KDM5DQ9BY66 1539 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 MX2P20592 715 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 RWDD4Q6NW29 188 aaKnown RBP19.76■□□□□ 0.75
HCG11-201ENST00000411553 RSBN1LQ6PCB5 846 aaPredicted RBP19.76■□□□□ 0.75
HCG11-201ENST00000411553 GIMAP8Q8ND71 665 aaPredicted RBP19.76■□□□□ 0.75
HCG11-201ENST00000411553 DHX38Q92620 1227 aaKnown RBP19.76■□□□□ 0.75
HCG11-201ENST00000411553 FBXO40Q9UH90 709 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 ZMYND10O75800 440 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 CDO1Q16878 200 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 BBS9Q3SYG4 887 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 THNSL1Q8IYQ7 743 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 TTLL11Q8NHH1 800 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 ATP6V0A4Q9HBG4 840 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 STXBP2Q15833 593 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 KLC3Q6P597 504 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 TTC25Q96NG3 672 aa19.76■□□□□ 0.75
HCG11-201ENST00000411553 PSMA2P25787 234 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 C1orf228Q6PIY5 440 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 HSPH1Q92598 858 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 EFHD1Q9BUP0 239 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 ZWILCHQ9H900 591 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 EXOC1LA0A1B0GW35 172 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 HOXC10Q9NYD6 342 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 PHLPP2Q6ZVD8 1323 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 CRKP46108 304 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 SPTLC3Q9NUV7 552 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 TBK1Q9UHD2 729 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 SOWAHDA6NJG2 315 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 CHEK2O96017 543 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 CCT5P48643 541 aa19.75■□□□□ 0.75
HCG11-201ENST00000411553 SH3RF3Q8TEJ3 882 aaPredicted RBP19.75■□□□□ 0.75
HCG11-201ENST00000411553 TNFAIP2Q03169 654 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 MTMR1Q13613 665 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 SNCBQ16143 134 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 SRRM1Q8IYB3 904 aaKnown RBP19.74■□□□□ 0.75
HCG11-201ENST00000411553 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.74■□□□□ 0.75
HCG11-201ENST00000411553 DONSONQ9NYP3 566 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 DR1Q01658 176 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 HP1BP3Q5SSJ5 553 aaPredicted RBP19.74■□□□□ 0.75
HCG11-201ENST00000411553 TSPYL2Q9H2G4 693 aaPredicted RBP19.74■□□□□ 0.75
HCG11-201ENST00000411553 PCDHA6Q9UN73 950 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 PCDHA8Q9Y5H6 950 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 MYO3BQ8WXR4 1341 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 TRIM67Q6ZTA4 783 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 PLEKHA8P1O95397 391 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 RWDD2BP57060 319 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 PDIK1LQ8N165 341 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 CDC26Q8NHZ8 85 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 TOPORSQ9NS56 1045 aaPredicted RBP19.74■□□□□ 0.75
HCG11-201ENST00000411553 LUC7L3O95232 432 aaKnown RBP19.74■□□□□ 0.75
HCG11-201ENST00000411553 POLIQ9UNA4 740 aa19.74■□□□□ 0.75
HCG11-201ENST00000411553 RPS6KA4O75676 772 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 SLCO1A2P46721 670 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 CENPUQ71F23 418 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 RHOT2Q8IXI1 618 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 NGRNQ9NPE2 291 aaKnown RBP19.73■□□□□ 0.75
HCG11-201ENST00000411553 ARAP3Q8WWN8 1544 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 SFI1A8K8P3 1242 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 NDUFA10O95299 355 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 FAM83BQ5T0W9 1011 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 CCDC124Q96CT7 223 aaKnown RBP19.73■□□□□ 0.75
HCG11-201ENST00000411553 FEM1BQ9UK73 627 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.73■□□□□ 0.75
HCG11-201ENST00000411553 UGGT1Q9NYU2 1555 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 IFT88Q13099 833 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 RNF219Q5W0B1 726 aaPredicted RBP19.73■□□□□ 0.75
HCG11-201ENST00000411553 VSTM4Q8IW00 320 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 MCPH1Q8NEM0 835 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 PYROXD1Q8WU10 500 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 VPS39Q96JC1 886 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 RMDN3Q96TC7 470 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 MRPL46Q9H2W6 279 aaKnown RBP19.73■□□□□ 0.75
HCG11-201ENST00000411553 IQANK1A0A1B0GTG1 560 aa19.73■□□□□ 0.75
HCG11-201ENST00000411553 CNOT10Q9H9A5 744 aaKnown RBP19.73■□□□□ 0.75
HCG11-201ENST00000411553 ZBTB5O15062 677 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 ATP8B1O43520 1251 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 MAP2K2P36507 400 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 PRPF38AQ8NAV1 312 aaKnown RBP19.72■□□□□ 0.75
HCG11-201ENST00000411553 RNF217Q8TC41 542 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 NEK9Q8TD19 979 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 RASGRF2O14827 1237 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 CLDN3O15551 220 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 PLS3P13797 630 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 SLC13A4Q9UKG4 626 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 PAMP19021 973 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 PIGOQ8TEQ8 1089 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 ALKBH8Q96BT7 664 aaKnown RBP19.72■□□□□ 0.75
HCG11-201ENST00000411553 A0A087WWV3 80 aa19.72■□□□□ 0.75
HCG11-201ENST00000411553 CTNND1O60716 968 aaKnown RBP19.72■□□□□ 0.75
HCG11-201ENST00000411553 PHKA2P46019 1235 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 321 ms