RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 IRF1P10914 325 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 PFKFB1P16118 471 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 AP1B1Q10567 949 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 EGFL8Q99944 293 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 KLHL8Q9P2G9 620 aaPredicted RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 GFPT2O94808 682 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 CXCR5P32302 372 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 ZNF394Q53GI3 561 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 TLR7Q9NYK1 1049 aaKnown RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 CLIC4Q9Y696 253 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 MYBP10242 640 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 GRIK1P39086 918 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 IL9RQ01113 521 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 CIAPIN1Q6FI81 312 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 SLC26A7Q8TE54 656 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 ERO1AQ96HE7 468 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 EIF2AQ9BY44 585 aaKnown RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 COPRSQ9NQ92 184 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 ERBB3P21860 1342 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 ZBED1O96006 694 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 KITP10721 976 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 LRRC31Q6UY01 552 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 BBOF1Q8ND07 529 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 RAPGEF5Q92565 580 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 PPP2R3CQ969Q6 453 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 ULK4Q96C45 1275 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 CASS4Q9NQ75 786 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 FGFR1OP2Q9NVK5 253 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 ZC3H4Q9UPT8 1303 aaKnown RBP12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 ARHGEF12Q9NZN5 1544 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 KIF28PB7ZC32 967 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 HSPA6P17066 643 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 NOSTRINQ8IVI9 506 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 EFHD1Q9BUP0 239 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 TRIM15Q9C019 465 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 HEY1Q9Y5J3 304 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 UBA6A0AVT1 1052 aaPredicted RBP12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 A6NNZ2 444 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 TUBB8Q3ZCM7 444 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 FAF2Q96CS3 445 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 SRP68Q9UHB9 627 aaKnown RBP12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 FGAP02671 866 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 GUCY2DQ02846 1103 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 LRRC41Q15345 812 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 RC3H1Q5TC82 1133 aaKnown RBP12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 KHDRBS2Q5VWX1 349 aaKnown RBP12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 TTLL6Q8N841 843 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 TRIM11Q96F44 468 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 OGFRQ9NZT2 677 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 ATP10DQ9P241 1426 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 KBTBD13C9JR72 458 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 TAC1P20366 129 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 UBE2SQ16763 222 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 NUDCD3Q8IVD9 361 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 KCTD17Q8N5Z5 321 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 GTSE1Q9NYZ3 720 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 CAPN7Q9Y6W3 813 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 ZHX2Q9Y6X8 837 aa12.05□□□□□ -0.48
PRPF40A-202ENST00000410080 TAS2R42Q7RTR8 314 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 FANCBQ8NB91 859 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 OR8K1Q8NGG5 319 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 SPZ1Q9BXG8 430 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 NGRNQ9NPE2 291 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 MAP3K20Q9NYL2 800 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 L3MBTL1Q9Y468 752 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 TMEM2Q9UHN6 1383 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 BLMP54132 1417 aaPredicted RBP12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 AFPP02771 609 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 KCTD16Q68DU8 428 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 ADCK2Q7Z695 626 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 TRIM42Q8IWZ5 723 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 GIPC2Q8TF65 315 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 CC2D2BQ6DHV5 1058 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 USP17L2Q6R6M4 530 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 RUNDC3BQ96NL0 473 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 WRNIP1Q96S55 665 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 PIM2Q9P1W9 311 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 MYOM2P54296 1465 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 ESRRGP62508 458 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 ARAP3Q8WWN8 1544 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 ALDH1A1P00352 501 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 NBPF20Q3BBV1 942 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 NBPF10Q6P3W6 841 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 PI4KBQ9UBF8 816 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 PEX3P56589 373 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 PSMC1P62191 440 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 VEPH1Q14D04 833 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 PTPN21Q16825 1174 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 GPATCH4Q5T3I0 446 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 KDELC2Q7Z4H8 507 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 MRPL47Q9HD33 250 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 SETSIPP0DME0 302 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 GNGT1P63211 74 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 C11orf96Q7Z7L8 435 aa12.04□□□□□ -0.48
PRPF40A-202ENST00000410080 SEMA3EO15041 775 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 HUS1O60921 280 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms